Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00804 ATGATTAAATTAACAGTTTTGACAATTGACATATTTAACAAGACAAACAAAGGAATACCTATTCCACATCACAAATCACACTCCATATACTTGCAGTTTTGCAAAATCATGGGTAGTGAGATAGATACTAAATCAATTGAACCTGTCCGGAATGCTGTCTCTTTGTTTGGAGATAAAGGTGATCAGAAGAAATATCAAGCTGCAAGGAGTAAGAGTGATTGTGGAAATGAGTTTGAGGAGCTGACAAAGGAATTGGCCAACTGCAAGTTTCAGTTAGAAGCAAAGCATGCTGCACACATGCAAGCACTTCTTAAGTTGGAGCATAGCCAAAAGATGATTCATGAATTGTCTACCCTACTGAAGAAATCTGACATTGAAAGAAACAAGAACATGAGTGAATGTTCAGAATGTAGATCTCGCAAAGGTGAACTTGAATCCAAGATGAAAGAGATGGTTGATCAGAGTTTGGAGGCTGCGAAGGTCCGAGACCAGTTTGCCCATGTTTTAAGCGAACTGAAGGCCACACAAAGGGAGCTTCTTAACAAAGAAACAGAACTTGTTGCTGCCAGAGATTCAGAAATGAACTCTTTGACCAAAGCAAAACAATTGGAATCCGCTTTGGAGGCTGAAAAGGAACAGAAAGAAGAACTTGTGCAGCAAGTGAAGGAGCTCAATGAAGCTATTCACAATTCAAAACTAGCTGCCATTGAATCTGAGAGAGAGAAGTTAGCTTTATTGTCTGAGAAGGATGAGCAAATTGATTTCGCTACAAAAGCTACTGCTCAGCAACAAGTTAAGGTTGCAAAGAAAGAAATAAATGCCTTGAGTATTACTAATGAATCACTCACTAGTGAGTTACAAGAGGCTAATGCAGAACTAAACATGAACAAGGAGAGCGACATTGAAACACAGGTGGAAATTGCATTGCTGAAGTCTAAGCTGCAGGAACATAGGGTGGTTTACAATAATGGAAAGATTACTGAAGAATCTACAACCGATCACTCAAAGGCAGAAGCTGAAGAGAGAAATAGTGAGAAGAACAATGAGCATGTGACAGGAAAATCCTTATTTGGAGTTGAAGGAGAGGTAGGAAGATTTTCAGAGTTAGCATTGATGAAAAAGGAGCTGGAAAATGCATCAGTGAAAATTTCGGAGTTGAGGGCTCGTGCAGAACAGGCTCTGAGCAGGGCTGAGTTTGCTGAGAATGCTAAAACAGCATTAGAGGAGAAAATAAGGAGACATAGGGAACATAGGCAGAGAAGAAGGCTTGCTCTTACTGCCCTTAGGGAGGAATCTACCCCTAAACCATTTAGTCCTTCCTCATCGTATGGAACACCTGGATCCTACCAGCCCTTAGGTAAGGTTCTCAACATGAAATTGTGA 1383 0.4042 MIKLTVLTIDIFNKTNKGIPIPHHKSHSIYLQFCKIMGSEIDTKSIEPVRNAVSLFGDKGDQKKYQAARSKSDCGNEFEELTKELANCKFQLEAKHAAHMQALLKLEHSQKMIHELSTLLKKSDIERNKNMSECSECRSRKGELESKMKEMVDQSLEAAKVRDQFAHVLSELKATQRELLNKETELVAARDSEMNSLTKAKQLESALEAEKEQKEELVQQVKELNEAIHNSKLAAIESEREKLALLSEKDEQIDFATKATAQQQVKVAKKEINALSITNESLTSELQEANAELNMNKESDIETQVEIALLKSKLQEHRVVYNNGKITEESTTDHSKAEAEERNSEKNNEHVTGKSLFGVEGEVGRFSELALMKKELENASVKISELRARAEQALSRAEFAENAKTALEEKIRRHREHRQRRRLALTALREESTPKPFSPSSSYGTPGSYQPLGKVLNMKL 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00804 460 Coils Coil 369 420 - -
Vian1g00804 460 MobiDBLite consensus disorder prediction 433 448 - -
Vian1g00804 460 MobiDBLite consensus disorder prediction 329 349 - -
Vian1g00804 460 Coils Coil 172 192 - -
Vian1g00804 460 Coils Coil 197 241 - -
Vian1g00804 460 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 40 410 - -
Vian1g00804 460 Coils Coil 258 299 - -
Vian1g00804 460 Pfam Weak chloroplast movement under blue light 41 338 IPR008545 -
Vian1g00804 460 MobiDBLite consensus disorder prediction 325 353 - -
Vian1g00804 460 MobiDBLite consensus disorder prediction 427 460 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00804 - - gmx:102665346 516.538
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g00804 1 8394780 8397210 Vian1g00804 1 8394780 8397210 ECH