Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00803 ATGGATAAGGCTCTCACTAAACTGGGAAGTGCTTGGATCTCCAAGAAAGCCAAGGCAGAGATTTCCCACATAACTGACGATCTATCAGCTCTCTCAACTACTGTGGAAGAAAAGACAAAACTTTTCATCAACAAGCTGAAAGGAAAATCCCAGAAGGCTTTACCAGATCTTCTTCGAGAGTACAACCTTCCTCCTGGTCTGTTCCCCCGGAACATAACTTGCTACGAGTTTGATGTAGCTAAAGGAAAGTTGGTGGTGCACTTGAGCTCTCCCTGTGAGGTGTGCTTCAAGGACTCATCCATTGTGAGGTATGCAAACCGTGTGAAAGGGAGCTTAACAAAGGGTAAGTTGAATGTTTTAGATGGAATGAAGACCAAGGTTCTTGTGTGGGTCAAGGTCACCAGTGTTGCTGTTGACAGTTACAAATCTGACAAAGTGTGGTTCACTGCTGCTGGAGTTAAGAAATCAAGGCCCAAAGATGCCTATGAAATGCCTCGTGAAGCTATTAAGGTAGAATCATTTTGA 525 0.44 MDKALTKLGSAWISKKAKAEISHITDDLSALSTTVEEKTKLFINKLKGKSQKALPDLLREYNLPPGLFPRNITCYEFDVAKGKLVVHLSSPCEVCFKDSSIVRYANRVKGSLTKGKLNVLDGMKTKVLVWVKVTSVAVDSYKSDKVWFTAAGVKKSRPKDAYEMPREAIKVESF 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00803 174 SUPERFAMILY At5g01610-like 3 173 IPR036758 -
Vian1g00803 174 Pfam Protein of unknown function, DUF538 56 163 IPR007493 -
Vian1g00803 174 Gene3D - 32 174 IPR036758 -
Vian1g00803 174 PANTHER T31J12.3 PROTEIN-RELATED 40 166 IPR007493 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00803 Vian-Chr1 8391856 8392708 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00803 - - gmx:100776470 315.849
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g00803 1 8391856 8392708 Vian1g00803 1 8391856 8392708 ECH