Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00801 ATGAGTTCTTCTCCGCCTCGTTCTCGTGGCGACGGCGAGAAAAGACCCAGGTTTTTCGACTCAAACGCCAAGACCCTCTGTTGGTCCAAGGCTGATATTGTCCCCGGCCGTCACCCTGAGAGGTGGCGCAAAGACGCCGCGGGTAACATTGTCTGCAAACGTTTCTACAACTGCATCGGCTGCCTCTGCTACGAGTACGATCACATCATCCCCTTCTCCAAAGGTGGTGAGTCCACAGCAGATAATTGTCAAATACTTCAATCAAGAGTTAACAGACTCAAATCGGACAAATATGACATTGATTCTAATCAATTGAAAGACTACTCTTGTGAGGTTAATTTTACTGATAAGGAGCTTGATATAATTGAGATGGCTGTTTACGGGGATGTGGTGCGGCCTGGAAATCAGTGTCGTTGCAGAACTATTGCTGAGAAACTTGGCAAATTTAAACCAAAAGATGACAAAGATGCTTGTAAGTTGCCACAGGGATGA 492 0.4614 MSSSPPRSRGDGEKRPRFFDSNAKTLCWSKADIVPGRHPERWRKDAAGNIVCKRFYNCIGCLCYEYDHIIPFSKGGESTADNCQILQSRVNRLKSDKYDIDSNQLKDYSCEVNFTDKELDIIEMAVYGDVVRPGNQCRCRTIAEKLGKFKPKDDKDACKLPQG 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00801 163 CDD HNHc 53 95 IPR003615 -
Vian1g00801 163 Pfam HNH endonuclease 65 96 IPR002711 GO:0003676|GO:0004519|GO:0008270
Vian1g00801 163 Gene3D - 36 116 - -
Vian1g00801 163 PANTHER HNH ENDONUCLEASE 6 141 - -
Vian1g00801 163 SMART HNH_5 46 92 IPR003615 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00801 Vian-Chr1 8372458 8375199 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00801 - - vra:106766777 334.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g00801 1 8372458 8375199 Vian1g00801 1 8372458 8375199 ECH