Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00795 ATGGGGCAAGACAATCACCACAAGCGCAGCACTAGCGCCGGTTTACCCACCTCCAACGCCCGAGGCCGCGCCACCGGGATCCCCCGCGGCCGCCAGATCCAGAAGACCTTCAACAACATCAAGATCACTATGCTATGCGGCTTTGTCACCATCCTCGTCCTCCGCGGCACCATCGGCGTCAATCTCGGCTCCTCCGATTCCGACGCCGTCAACCAGAACCTTATCGAGGAGACCAACCGCATCCTCGCCGAGATCCGATCCGACGCCGACCCCTCCGATCCCGACGACCAGCAACCCTTCAACCCCAACGCTACCTTCACCCTCGGCCCCAAAATCAATAATTGGGACCAAGAGCGCCAAAATTGGCTCACTCAAAACCCTGAATACCCTAATTCCATCAGAGGTAAACCTCGCATCTTGCTCCTCACTGGTTCCCCTCCCAAACCCTGTGATAACCCTATTGGAGATCATTACCTCTTGAAGTCCATTAAGAACAAGATTGATTACTGTAGATTACACGGGATTGAAATTGTGTACAATTTGGCTCATTTGGATGTGGAACTTGCTGGCTACTGGGCAAAGTTGCCTATGATTCGGAGGTTGATGTTGTCACATCCCGAGGTTGAGTGGATTTGGTGGATGGATAGTGATGCTTTTTTTACTGATATGGTGTTTGAGCTTCCCATGTCTAAGTACGATGCTTATAATTTGGTTCTTCATGGATACCCTGATTTGTTGTTTGACCAGAAGTCTTGGATTGCGGTGAATACTGGGAGTTTTCTGTTTAGGAACTGCCAGTGGTCTTTGGATTTGCTTGATGAATGGGCTCCCATGGGTCCCAAGGGGCCGGTTCGCGAGGAGGCCGGCAAGATCTTGACGGCCAATCTCAAGGGGAGGCCGGCATTTGAGGCCGACGATCAGTCTGCATTGATATACTTGCTGCTGTCCCAGAAGGAGAAGTGGATGGATAAGGTGTTTCTTGAGAATTCGTTCTATTTGCACGGTTACTGGGCAGGGTTGGTTGATCGGTATGAGGAGATGATTGAGAAGTATCACCCCGGTTTGGGTGATGAGAGATGGCCGTTTGTGACACATTTTGTCGGCTGTAAGCCCTGTGGGAGCTATGGAGATTATCCTGTGGAGAGGTGCCTCAGTAGCATGGAGAGGGCTTACAATTTTGCTGATAATCAGGTGCTTAAGCTCTATGGTTTCAGGCATCGTGGTCTGTTGAGCACCAAGATCAAGAGGATCAGAAATGAGACTGTTACTCCTTTGGAGTTTGTAGACCAGTTTGATATTCGAAGGCATTCTACGGAAAGCAAGGGATTGAAGAGCTAG 1338 0.503 MGQDNHHKRSTSAGLPTSNARGRATGIPRGRQIQKTFNNIKITMLCGFVTILVLRGTIGVNLGSSDSDAVNQNLIEETNRILAEIRSDADPSDPDDQQPFNPNATFTLGPKINNWDQERQNWLTQNPEYPNSIRGKPRILLLTGSPPKPCDNPIGDHYLLKSIKNKIDYCRLHGIEIVYNLAHLDVELAGYWAKLPMIRRLMLSHPEVEWIWWMDSDAFFTDMVFELPMSKYDAYNLVLHGYPDLLFDQKSWIAVNTGSFLFRNCQWSLDLLDEWAPMGPKGPVREEAGKILTANLKGRPAFEADDQSALIYLLLSQKEKWMDKVFLENSFYLHGYWAGLVDRYEEMIEKYHPGLGDERWPFVTHFVGCKPCGSYGDYPVERCLSSMERAYNFADNQVLKLYGFRHRGLLSTKIKRIRNETVTPLEFVDQFDIRRHSTESKGLKS 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00795 445 Pfam galactosyl transferase GMA12/MNN10 family 136 374 IPR008630 GO:0016020|GO:0016757
Vian1g00795 445 MobiDBLite consensus disorder prediction 1 26 - -
Vian1g00795 445 FunFam xyloglucan 6-xylosyltransferase 2 135 286 - -
Vian1g00795 445 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 135 283 IPR029044 -
Vian1g00795 445 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 5-RELATED-RELATED 21 430 IPR008630 GO:0016020|GO:0016757
Vian1g00795 445 MobiDBLite consensus disorder prediction 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00795 Vian-Chr1 8291363 8292700 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g00795 10 437 Glycosyltransferase AT5G07720 79.540 0.0 741
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00795 K08238 - gmx:100819400 856.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g00795 1 8291363 8292700 Vian1g00795 1 8291363 8292700 ECH