Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00791 ATGGGTTCTACCGCTGAAGACCGATCAGAGATTGTGTTCTTCGATGTGGAGACCAGCGTCCCCACTCGAACAGGTCAGGGTTTTGCCATTCTCGAATTCGGAGCCATTTTGGTTTGCCCCAAGACGCTCACGGAGCTCCGCAACTACTCCACCCTCATCCGACCCCCTGTTCTCTCCGTCATCTCCCCCTTGTCCCAGCGCTGCAATGGCATCACCGCCGACGCCGTCGCCGCCGCGCCGACTTTTGCCGACATTGCTCACCTCGTCTACGACCTTCTTCACGGGAGGATTTGGGCGGGTCATAATATCATAAGGTTTGACTGTGTTCGGATTAGAGATGCTTTTGCTGAGATTAATCAGCCGCCACCTGAACCTAAGGGAACCATTGACTCTCTAGTTTTGTTGACTCAGAAGTTTGGAAGAAGAGCTGGTGACATGAAGATGGCTACTCTTGCTACTTATTTTGGACTTGGACGCCAGACACATAGGAGCTTAGATGATGTTCGGATGAATCTTGAAGTCCTTAAATACTGTGCAACCGTTCTATTCTTGGAGTCAAGTCTCCCGGATATATTCACTGCAAACAGTTGGGTTTCACCAAAGACTACGACAAGAAGCCGCAGTAATGGGAAATCTCCATCACAGGGGGGCTTATTAAACATTAATGGGGTTTCTGTATTATCATCTCCTGCTGTTGAATCCAAAGACAAAAGTCATCCTATAATTTCTTTAGCAATGAGCGGCCCAAAAGGGGATGCCCTTAATAATGCAGATCCTAATATAGTTCAATCGGATCCTTTTAATTTGAGTACTCCGGAGGAAGAAATAAATAGAGAACCCATTAAGTCAGATGTTTCCACGGTGGAAAAACCCATGCAAGAGTCACCTGATTTGGCTTCCTCGTCTTCTGTGTTTCAGCCTAGCAGCAGCTCTATTCTTGTTTTTGAACCTGATAGAATATGTGTCCCTTCTATTGATGCATCTCTTGTTCCATCTTTTCAAGGCAGTCAAAGGATAGAATTGCTGCATGAAGGTTTCCCATTCCAACTTTATTGTACTGATTTGAAAGTGCGGTTTGGAATAAGCACGAAGTTTTTTGATAATGCTGGCCGGCCACGATTGAGTTTTGTGGTTGATTCATCTCCAAGTCTATGTAATGTTCTTGATGCATGTGACGACGTTGCTAAGAAGTTAACGGTAGATTCTGGCAGCAGCTCTGATTGGAGGCCTGTTGTCATCAGGAAAGAAGGTTTCTTCAACTATCCTACTGTCAGATTGCACATACCTACAGCTGTAGTCGCAGACATTGCCATTTATGCCACAGAAATATATCAGAAAGAGTCTTCTGGAGCAGTGCAAAGACTTCTCTTCAGTAAGTTTGATGCTGCAGAACTTGGTTCCTTGTTCATGCCTGGGACATTTGTTGATGCCTTCTTCTCTTTAGATCCCTATGACTATCAGCAGAATGCAGGGATTAAATTAGTTGCTAAAAAATTGATCATTCATTGCAAATAG 1515 0.4475 MGSTAEDRSEIVFFDVETSVPTRTGQGFAILEFGAILVCPKTLTELRNYSTLIRPPVLSVISPLSQRCNGITADAVAAAPTFADIAHLVYDLLHGRIWAGHNIIRFDCVRIRDAFAEINQPPPEPKGTIDSLVLLTQKFGRRAGDMKMATLATYFGLGRQTHRSLDDVRMNLEVLKYCATVLFLESSLPDIFTANSWVSPKTTTRSRSNGKSPSQGGLLNINGVSVLSSPAVESKDKSHPIISLAMSGPKGDALNNADPNIVQSDPFNLSTPEEEINREPIKSDVSTVEKPMQESPDLASSSSVFQPSSSSILVFEPDRICVPSIDASLVPSFQGSQRIELLHEGFPFQLYCTDLKVRFGISTKFFDNAGRPRLSFVVDSSPSLCNVLDACDDVAKKLTVDSGSSSDWRPVVIRKEGFFNYPTVRLHIPTAVVADIAIYATEIYQKESSGAVQRLLFSKFDAAELGSLFMPGTFVDAFFSLDPYDYQQNAGIKLVAKKLIIHCK 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00791 504 PANTHER DNA POLYMERASE III SUBUNIT EPSILON 8 493 - -
Vian1g00791 504 SUPERFAMILY Ribonuclease H-like 10 180 IPR012337 -
Vian1g00791 504 Gene3D - 4 182 IPR036397 GO:0003676
Vian1g00791 504 MobiDBLite consensus disorder prediction 288 303 - -
Vian1g00791 504 FunFam Exonuclease family protein 4 182 - -
Vian1g00791 504 MobiDBLite consensus disorder prediction 200 221 - -
Vian1g00791 504 SMART exoiiiendus 10 184 IPR013520 -
Vian1g00791 504 CDD DEDDh 12 176 - -
Vian1g00791 504 Pfam Exonuclease 12 175 IPR013520 -
Vian1g00791 504 MobiDBLite consensus disorder prediction 242 303 - -
Vian1g00791 504 MobiDBLite consensus disorder prediction 257 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00791 Vian-Chr1 8266105 8269710 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00791 - - gmx:100788659 863.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g00791 1 8266105 8269710 Vian1g00791 1 8266105 8269710 ECH