Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00784 ATGAAGGGTAGTATTGCTACTGAGTCGAGTAGCAGAGAAGAAAGAAGAAGGAGGGCGAGGTCTTCGTCACCACTGAAGGACAGATCCAAAACCTCTTCGTCTAAGTTATCTTCTCCATCCAAACGAAGCACATCACCCTCTGCCACTGTCCTCGACGTTGACCATGACGTATTCTCTCTCTCTCACGATTATCCTAACCCTAACCCTCGGAGCTTCCCTCACAGCGTTAAGCAGAAATGCTGGGAAAAGGCAGACAAGGTCAAAGGACGAGACCCCGACCGCTGGCGCAGGGACGCCCTCGGCAATACTGTCTTTCGCAAGCTCGTAGGTTGCCCCGGTTGTCTCTGTCATGACTACGACCACATTGTCCCTTACTCTAAGGGGGGAGAAAGCACTCTGGAAAACTGTCAAGTATTACAGGCAACAGTTAATCGTTCAAAGGGTAACCGAACAGATATCTCCAAAGCTGAACTTATTCAAAAGAGTTCTTATTGCAGGGTTTCAGATCGTGATATGGATCTTCTTGAACTGTCTGCCTATGGTAATGTCCGGCGTGGACCCGATACTGGGGGATGTAGAATCCAATGA 588 0.4898 MKGSIATESSSREERRRRARSSSPLKDRSKTSSSKLSSPSKRSTSPSATVLDVDHDVFSLSHDYPNPNPRSFPHSVKQKCWEKADKVKGRDPDRWRRDALGNTVFRKLVGCPGCLCHDYDHIVPYSKGGESTLENCQVLQATVNRSKGNRTDISKAELIQKSSYCRVSDRDMDLLELSAYGNVRRGPDTGGCRIQ 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00784 195 Pfam HNH endonuclease 117 150 IPR002711 GO:0003676|GO:0004519|GO:0008270
Vian1g00784 195 MobiDBLite consensus disorder prediction 26 50 - -
Vian1g00784 195 PANTHER HNH ENDONUCLEASE 11 195 - -
Vian1g00784 195 SMART HNH_5 100 145 IPR003615 -
Vian1g00784 195 MobiDBLite consensus disorder prediction 1 50 - -
Vian1g00784 195 Gene3D - 75 169 - -
Vian1g00784 195 CDD HNHc 104 148 IPR003615 -
Vian1g00784 195 MobiDBLite consensus disorder prediction 7 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00784 Vian-Chr1 8187039 8188910 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00784 - - gmx:100500174 327.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g00784 1 8187039 8188910 Vian1g00784 1 8187039 8188910 ECH