Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00781 ATGGACTTCAATCTTGCATTAGTTATTGTGGTAATCACCATTTTGGGAATTGGTCTTGATGGATGCCATAGCAAGGTTGTGCAGTTCATTTTTGGAGACTCACTCTCTGATGTTGGTAATAACATGCATCTCTCTAGAAGCCTTGCTCAAGCAAGCTTGCCTTGGTATGGCATAGACATGGGAAATGGGTTACCTAATGGAAGGTTCACTAATGGTCGCACAGTAGCTGACATAATAGGTGACCGTACTGGCCTCCCTAGGCCTCCTGCATTCCTGGACCCATCTGTGAGTGGAGAAGTTATACTAGAAAATGGTGTGAACTATGCTTCTGGTGGTGGCGGCATTTTGAATGAAACCGGTGCCTATTTTATCCAAAAGTTTTCCCTGGACAAACAAATTGAGCTATTTCAGGGGACACAGGAGTTGATCAGAGGTAAAATTGGAAAAAGGGCCGCTGACAAGTTTTTCAAGGAAGGTCGTTATGTTGTTGCTTTAGGGAGCAATGATTTCATCAACAACTACTTGATGCCAGTTTACAGAGATTCATGGACATACAATGATGAGACATTCATGGACTACTTAATAGGAACACTGGAAAAACAGCTAAAGTTACTTCATAGTTTAGGAGCAAGACAGCTGGTGGTTTTCGGGTTGGGTCCAATGGGCTGCATTCCCCTTCAAAGGGTGCTCAGTACAACTGGGAATTGTCGAGAAAAGGCGAACAAGCTGGCTCTTACCTTCAACAAAGCTGTAAGCGAGTTAGTAGATGACTTGGGGAATCATTTTCCTGATTCAACCTATAGATTTGGAGATGCATATGATGTTGTCTATGATGTGATTAGCAATCCAAATAAGTATGGATTTCAAAACTCAGACTCACCATGCTGTTCCTTCTGGAATATTCGACCCGCCCTTACATGTGTACCTGCATCAAGTCTGTGCAAAGATAGAAGTAAATATGTCTTTTGGGATGAATACCATCCCACAGACAGTGCTAATGAGCTTATTGCAGATGAACTCATCAAGAAATTTGGACTTCTGAATTCTGATCAAGGGGGTGCACCTTCACCAGCTCCTGATGCTGCTCCATCTCCTGATGTTGCTCCATCTCCAGAAGACCAGTGA 1125 0.4311 MDFNLALVIVVITILGIGLDGCHSKVVQFIFGDSLSDVGNNMHLSRSLAQASLPWYGIDMGNGLPNGRFTNGRTVADIIGDRTGLPRPPAFLDPSVSGEVILENGVNYASGGGGILNETGAYFIQKFSLDKQIELFQGTQELIRGKIGKRAADKFFKEGRYVVALGSNDFINNYLMPVYRDSWTYNDETFMDYLIGTLEKQLKLLHSLGARQLVVFGLGPMGCIPLQRVLSTTGNCREKANKLALTFNKAVSELVDDLGNHFPDSTYRFGDAYDVVYDVISNPNKYGFQNSDSPCCSFWNIRPALTCVPASSLCKDRSKYVFWDEYHPTDSANELIADELIKKFGLLNSDQGGAPSPAPDAAPSPDVAPSPEDQ 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00781 374 SUPERFAMILY SGNH hydrolase 156 343 - -
Vian1g00781 374 CDD SGNH_plant_lipase_like 29 343 IPR035669 -
Vian1g00781 374 Gene3D SGNH hydrolase 27 344 IPR036514 -
Vian1g00781 374 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 28 343 - -
Vian1g00781 374 MobiDBLite consensus disorder prediction 358 374 - -
Vian1g00781 374 Pfam GDSL-like Lipase/Acylhydrolase 29 339 IPR001087 GO:0016788
Vian1g00781 374 MobiDBLite consensus disorder prediction 348 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00781 Vian-Chr1 8159514 8161419 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g00781 29 340 Acyl Lipid Metabolism Gene Families AT4G10950 32.484 6.56e-59 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00781 - - gmx:100815129 665.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g00781 1 8159514 8161419 Vian1g00781 1 8159514 8161419 ECH