Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00767 ATGGAGTCGGCGGGGGAGTGGCTGGAGAAGGCGCTGGTCGAGTTGTGCTCCAAGATTGAAACTGGTTTGGGTTTAGGTTTGGATGAAGAGATCATCAAAGGCCTTGTTTCTTATTGCGACCTTGCCCAGCCACAAGATGCCAAAGAGTACCTTGACAATATAATTGGTCAGGAAGCAGGGAAAACCGTGATTGCAGAGTATTTACGGCGAAGAGGTTATTCAGAGTTCAGTGCTAACACAGATGTTCCAACTACCAAATTACATGCGTATGTCAAACCGCCATCTGTTGAGTCATCTGCTGGTGGAACAAAAAAATCAGTTAGAGCATCAAAAGGCTCTGGCCGCAGCCATCAAGCAGAACCCAGCAAAAATGTGCTTAGCAGCAATCAGGAAAATCAAACTCCAACTGTTGGAAGTGAATCGAGATCGTCACAAAAGGGAAACCAAGTGAATTCCAAAAAGAAGAAAGCTGGGAAAGTTGTTTCACTTGCTGAGGCTGCCAAAGGGTCAATTGTGTTCCAGCAGGGAAGGCCATGCTCTTGTCAAGCACGTCGACACAGGCTGGTCAGCAATTGCTTGTCCTGTGGCAAAATAGTTTGTGAGCAAGAAGGAGAAGGGCCTTGTCAGTTTTGTGGTGCACTTGTGTTGAGAGAGGGAAGTTCCTATGCCGGTCTGGAAGAAGGTTTGCCTCCCTTGTCAGATGCCGAGGCTGCTGCTGAAGCTTATGCAAAAAGGCTTGTAGAATATGACCGGAACTCTGCAGCTCGTACAACAGTCATTGATGACCAAAGTGACTACTACGAGATTGATGGAAACAGTTGGTTGTCAAAGGAGGAAAAGGAACTATTGAAGAAGAAGCAAGAGGAGATGGAAGAAGCTGAGCGAGCCAAACGGAATAGAGTTGTAGTGACTTTTGATCTTGTCGGCCGCAAGGTCCTTGTGAATAAAGACGAAGTTTCAGAATTACAGTCTGAAAATAGAATATTACGTCCACGGGATGAAAGGGAAGTCAACCGTATCAAACCAAACCCAACTCTTAAGTTTCAACCGGTTTTTGTGGACCTGGGCTTTAGTAGGAAGTCTGCTAAAGATAAGCAATCACATAAAGGTATAAGGAAGGGCTTGTGCTTAGAGATTACTGGAAGAGTGCAGCATGATAGTAATGACCAGAAGTATTTTATGATGGAAAACCAATTGGCAACAGCTTCAAATGAAAATGTTTGGCATGCATCTTCGGGAAATGGAGTGCACATGGAAGATGATGGTGAATGTTTACCGAACTATGATAAATAA 1293 0.4462 MESAGEWLEKALVELCSKIETGLGLGLDEEIIKGLVSYCDLAQPQDAKEYLDNIIGQEAGKTVIAEYLRRRGYSEFSANTDVPTTKLHAYVKPPSVESSAGGTKKSVRASKGSGRSHQAEPSKNVLSSNQENQTPTVGSESRSSQKGNQVNSKKKKAGKVVSLAEAAKGSIVFQQGRPCSCQARRHRLVSNCLSCGKIVCEQEGEGPCQFCGALVLREGSSYAGLEEGLPPLSDAEAAAEAYAKRLVEYDRNSAARTTVIDDQSDYYEIDGNSWLSKEEKELLKKKQEEMEEAERAKRNRVVVTFDLVGRKVLVNKDEVSELQSENRILRPRDEREVNRIKPNPTLKFQPVFVDLGFSRKSAKDKQSHKGIRKGLCLEITGRVQHDSNDQKYFMMENQLATASNENVWHASSGNGVHMEDDGECLPNYDK 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00767 430 Pfam Putative zinc finger motif, C2HC5-type 177 217 IPR009349 GO:0005634|GO:0006355|GO:0008270
Vian1g00767 430 MobiDBLite consensus disorder prediction 112 151 - -
Vian1g00767 430 Coils Coil 276 300 - -
Vian1g00767 430 MobiDBLite consensus disorder prediction 411 430 - -
Vian1g00767 430 Coils Coil 232 252 - -
Vian1g00767 430 MobiDBLite consensus disorder prediction 90 158 - -
Vian1g00767 430 PANTHER THYROID RECEPTOR INTERACTING PROTEIN RELATED 6 404 IPR039128 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00767 K23398 - gmx:100810833 714.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g00767 1 8038301 8040385 Vian1g00767 1 8038301 8040385 ECH