Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00760 ATGTTCAAGGGTTCATCCTGTACTGCTTCAAAGGACGTAGCAAACTCAAGTGAAGAGGAGAACAAAGGGGCTTGTGATACTTTATCCTCCATGGATGTCTCAAACAACAAGGGCTCGCAGGTAGATGAAAAAGAACCTGTGCTAAAAAAGTTATCCAAAACTTCAGATGACCCCGACGAGGAGGGTGGCAAGAGGGTTATGGCTTTCCTTATCCTTCCCCAGGACCAAGAGAATGAGCAAAACCATGAAGCTGAGATTGCTGACAAAACCCCACGTATTGGAAATCTCTACAGTGATCTCTCTATCAATGTTCTCCTAAAACTGTCAAGGTCTGATTATGGTATAATTTCTGCATTAAACAGTAGTTTTCGATCTCTGATTCGGAGTGGAGAACTGTATAGGCTGAGGCGGGAAATGGGTATCGTAGAGCATTGGATTTACTTCTCTTGCAATCTCCATCAATGGGAGGCATATGATCCAAACCGTGGCCGCTGGATGAAGTTGCCAAAAATGCCTCGTAATGACTGCTTTATGTGTTCGGACAAGGAGTCGTTGGGTGTTGGTACTGATCTTCTTGTTTTCGGAAGGGATATATTGGGTCCAATGGTTTATGGATATAGCCTTTTGACCAACTCCTGGTCAACTGCTGTAGAAATGAACATTCCCAGATGCTTGTTTGGATCTGCAAGCAATGGAGGAATTGCCATACTGGCTGGTGGTGTTGACCCAGTGGGTAATGTCTTGAATGTAGCTGAACTTTATAACTCAGAAACCAGAAAGTGGGAGACTCTTCCAAACATGCATAAGAAAAGGAGGATGTCTTCTGGTGTATTCATGGATGGAAAATTTTATGTGATTGGTGGAATTGCAGAAGACAACAAAACAGAGATAACCAGTGGTGAGGAATATGATTTGGAGACGAAAACATGGCGTGAAATACCAGACATGTTTCCTCCGCGAGGTGGAGAACCGAATATAGGGGCTCCTCCTTTGCTTGCAGTAGTGAACAATGTATTGTATTCTGCAGATTGTAACCAGCACATAGTAAGAAGATATGAGAAAGAGAGTAATAAATGGGTAACCATTGGAAATCTTCCTGAGAGAACATCGTCTATAGGTGGATGGGGAATAGGATTTAGGGCATGTGGAAATCGACTGATGGTTATTGGTGGGCTTACCACTGAGAGTTCAGGTGTTACTGAAATCAATTCTTGGATCCCAAGTGAACATCCACTGCAGTGGAACATCCTTGAGAGAAGGCGGATAGGGAGTTTTGTCAGCAATTGCGCAGTCATGGGATGCTGA 1305 0.436 MFKGSSCTASKDVANSSEEENKGACDTLSSMDVSNNKGSQVDEKEPVLKKLSKTSDDPDEEGGKRVMAFLILPQDQENEQNHEAEIADKTPRIGNLYSDLSINVLLKLSRSDYGIISALNSSFRSLIRSGELYRLRREMGIVEHWIYFSCNLHQWEAYDPNRGRWMKLPKMPRNDCFMCSDKESLGVGTDLLVFGRDILGPMVYGYSLLTNSWSTAVEMNIPRCLFGSASNGGIAILAGGVDPVGNVLNVAELYNSETRKWETLPNMHKKRRMSSGVFMDGKFYVIGGIAEDNKTEITSGEEYDLETKTWREIPDMFPPRGGEPNIGAPPLLAVVNNVLYSADCNQHIVRRYEKESNKWVTIGNLPERTSSIGGWGIGFRACGNRLMVIGGLTTESSGVTEINSWIPSEHPLQWNILERRRIGSFVSNCAVMGC 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00760 434 SMART kelc_smart 234 281 IPR006652 GO:0005515
Vian1g00760 434 SMART kelc_smart 282 337 IPR006652 GO:0005515
Vian1g00760 434 MobiDBLite consensus disorder prediction 38 61 - -
Vian1g00760 434 MobiDBLite consensus disorder prediction 1 37 - -
Vian1g00760 434 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 83 434 - -
Vian1g00760 434 Pfam Kelch motif 271 316 IPR006652 GO:0005515
Vian1g00760 434 Pfam Kelch motif 222 267 IPR006652 GO:0005515
Vian1g00760 434 FunFam F-box/kelch-repeat protein SKIP11 138 419 - -
Vian1g00760 434 MobiDBLite consensus disorder prediction 1 61 - -
Vian1g00760 434 SUPERFAMILY Kelch motif 150 430 IPR015915 GO:0005515
Vian1g00760 434 Gene3D - 135 430 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00760 Vian-Chr1 7955008 7956312 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g00760 84 266 EF-hand Containing Proteins AT4G39560 29.703 3.24e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00760 - - pvu:PHAVU_003G191300g 685.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g00760 1 7955008 7956312 Vian1g00760 1 7955008 7956312 ECH