Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00759 ATGACTAAGGTGGTGTTGTTGTTATCTTTTCTGTTGGAGATTTTGATCCTTGTTCAGGCTCTTGACAATCATAGGAAAATTGGGTTTTATGAACTGGAGAGAGCAAATTTCAAACTCAATTTGACAAATTATGGTGCTACAATTGTGTCTGTGGTAACCCCTGATAAACACGGAAAACTAGCTGATATTGTTCTTGGTTATGATTCTCTTGATTCTTATAAGAATGACACAACTTATTTCGGGGCAGTGATTGGACGGGTGGCCAATAGGATTGGAGGTGCTAAATTCACTTTGAATGACAAAACCTACCACTTACCCGCAAATGATCACGGAAACACACTTCACGGCTTTCCTGGAAAACTCAAAGTCAAAGTGACTTACAAGCTCGTTGGAGCACACAAACTGATTGTGAAAATGATTGCCAAGTCCGTGAACAAAGCCACACCAGTGAATCTTGCCCAACATACTTACTGGAACCTTGGGGGACACAACAGTGGTAACATTCTTTCTCATCATGTTCAGATCTTTGGTTCACACATCACACCCGTGGACAAGCTTCTTATTCCCACTGGCGAAATCAGATCTGTAAAGGGCACCCCCTATGATTTTCTTGAACCAAAAAAAGTTGTAACCCACATTCGTAAGCTTCCGGATCTATATGATATGAACTATGTGCTGGACAAAAGTTTCCAAAATCAGTTAACCAAGGCTGCGGTAGTGAGAGACCCTGTCTCTGGGAGGAAAATGGAGTTGTGGTCAAACCAACTTGGTATGCAGTTTTATACTAGTGGTCAGTTAATTGGTACCAAAGGCAAGGATGGGGCCATATACCACAAGTTTGCTGGCATTGCCTTGGAGACACAGGGTTTCCCAGATTCTGTGAATCACCCTTACTTTCCAACACAGATTGTGAAGCCTGGGGAGACTTACGAGCACATCATGTTTTACAGATTCACAGCTAGCTAA 966 0.4224 MTKVVLLLSFLLEILILVQALDNHRKIGFYELERANFKLNLTNYGATIVSVVTPDKHGKLADIVLGYDSLDSYKNDTTYFGAVIGRVANRIGGAKFTLNDKTYHLPANDHGNTLHGFPGKLKVKVTYKLVGAHKLIVKMIAKSVNKATPVNLAQHTYWNLGGHNSGNILSHHVQIFGSHITPVDKLLIPTGEIRSVKGTPYDFLEPKKVVTHIRKLPDLYDMNYVLDKSFQNQLTKAAVVRDPVSGRKMELWSNQLGMQFYTSGQLIGTKGKDGAIYHKFAGIALETQGFPDSVNHPYFPTQIVKPGETYEHIMFYRFTAS 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00759 321 SUPERFAMILY Galactose mutarotase-like 19 318 IPR011013 GO:0003824|GO:0005975|GO:0030246
Vian1g00759 321 CDD galactose_mutarotase_like 30 318 IPR047215 GO:0016853
Vian1g00759 321 PIRSF GALM 17 116 IPR015443 GO:0016853|GO:0019318
Vian1g00759 321 PIRSF GALM 115 321 IPR015443 GO:0016853|GO:0019318
Vian1g00759 321 PANTHER ALDOSE-1-EPIMERASE 116 319 - -
Vian1g00759 321 Pfam Aldose 1-epimerase 116 316 IPR008183 GO:0005975|GO:0016853
Vian1g00759 321 Gene3D - 17 117 IPR014718 GO:0030246
Vian1g00759 321 Gene3D - 118 320 IPR014718 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00759 Vian-Chr1 7933903 7935563 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g00759 11 320 Miscellaneous Gene Families AT3G47800 52.478 2.31e-124 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00759 K01785 - gmx:100806956 490.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g00759 1 7933903 7935563 Vian1g00759 1 7933903 7935563 ECH