Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00747 ATGTTTGTCTGCTTACAGGATAATGTCTTTGTTAATGTTGTTGCCTCAATTCAATATCGTGCCCTGGCTGAGAAGGCCAATGATGCTTTTTACAGACTTAGCAATACAAAGACCCAAATTCAGGCTTATGTTTTTGATGTAATTAGGGCAAGTCTTCCGAAGCTCAACTTGGATGATGCTTTTGAGCAGAAAAATGAAATTGCCAGAGCTGTGGAAGAAGAACTTGAGAAGGCTATGTCAGCTTACGGGTTCGAAATTGTTCAAACACTGATTGTTGATATAGACCCAGATGATCGTGTGAAGCGAGCTATGAATGAAATCAATGCTGCTGCAAGATCGAGGGTGGCAGCTAATGACAGGGCAGAGGCGGAGAAGATCTTGCTAATTAAACGAGCAGAGGGTGAGGCTGAATCTAAATATCTCTCTGGGTTGGGTATTGCTCGCCAACGTCAAGCAATTGTGGATGGATTGAGAGACAGTGTGCTTGGATTCTCAGTCAATGTACCTGGGACGACTGCAAAAGATGTTATGGACATGGTCCTTGTCACTCAGTATTTTGATACTATGAAAGAAATTGGCGCTGCCTCCAAGTCTTCTGCTGTCTTTATTCCACATGGACCTGGTGCTGTTCGCGATGTTGCCACCCAAATTCGTGATGGCCTTCTTCAGGCTTCTCATCAGTAG 684 0.4401 MFVCLQDNVFVNVVASIQYRALAEKANDAFYRLSNTKTQIQAYVFDVIRASLPKLNLDDAFEQKNEIARAVEEELEKAMSAYGFEIVQTLIVDIDPDDRVKRAMNEINAAARSRVAANDRAEAEKILLIKRAEGEAESKYLSGLGIARQRQAIVDGLRDSVLGFSVNVPGTTAKDVMDMVLVTQYFDTMKEIGAASKSSAVFIPHGPGAVRDVATQIRDGLLQASHQ 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00747 227 CDD SPFH_like_u4 7 221 - -
Vian1g00747 227 Gene3D Band 7 domain 3 110 IPR036013 -
Vian1g00747 227 Pfam SPFH domain / Band 7 family 6 125 IPR001107 -
Vian1g00747 227 Coils Coil 57 81 - -
Vian1g00747 227 SUPERFAMILY Band 7/SPFH domain 6 114 IPR036013 -
Vian1g00747 227 PANTHER STOMATIN-LIKE PROTEIN 2, MITOCHONDRIAL 6 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00747 Vian-Chr1 7769461 7770429 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00747 - - gmx:100804982 403.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g00747 1 7769461 7770429 Vian1g00747 1 7769461 7770429 ECH