Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00731 ATGAATTACTGCCAGCAAGAGATAGAACGACGTAGTTGTCACCAACCTGAAATCGATTATCCTCAGGCGCCAAAACCAGAGATGAAAAGAGGGAGAATAGGGAAGTTAGATACTCTTGTCTCATTCACCAGACAGCGATCCACTCAGATTTTCATCGTTCTTGGGTTCTTCTACATTCTCGTCGTCTTCCTCGAGATACCCTTCGTCTTCAGAACCACTCAAGAACGACCGTTTCGCCTCCCGCCGCTCGTTCGGCCCCCAAACGGCGTCGTCTCGGGTTTGACCCTAAACGATGCCGCATTTGATTCCTTCCTCTACCAATCCGCTTGCCGCCTCGGCAGGGTTCTCTGGGCCGAACTTAAATCAGGTAACGTGCAGGCCCCCGTTTCCAAGCTCGATAATAAATCCAGGCCATGCCCCGAATCCATATCGGTATCCGGGCCCGAGTTTTTTAGCCGCGGGAGGTCGATGGTGATTCCCTGTGGGCTCACGTTAGGGTCCTATGTAACCGTGGTTGGGGAGCCGTTAAGAGCGCAAAGGAAGAAGTGGCAGTTTATGATGGAGTTGCAGGGGCTGACGACGGTGGAGGGTGAAGAACCACCTAGGGTCTTACATTTCAATCCTAGGTTGAGAGGGGATTGGAGTGGAAAGCCTGTGATTGAACTCAACACTTGTTACCGCATGCATTGGGGTACTGCAATGCGCTGTGATGGTTGGAAATCAAGAGCTGGTGAAGATACTGTGGATGGGTTGGTGAAATGTGAGAAGTGGATTCGGGGTGATGATGGTGACAGACATGCAGTTGAGTCCAAGGCAGAGTGGTGGTTGAAGAGATTGATTGGTCGGACAAAACGAGTAGCAGTTGATTGGCCATTTCCATTTTCTGTGAACAAGCTATTTGTTCTTACTCTTAGTGCTGGGTTGGAGGGTTACCATATTTATGTTGATGGGAGGCATGTCACCTCTTTTCCTTATCGCACTGGCTTTACTCTTGAGGATGCCACTGGTCTTATTTTGAGCGGGGACATTAGTGTCCGTTCTGTATTTGCTGCCTCTTTGCCCTTGGTGCATCCCAACATTTCCTCGCAGCAGCATCTTGAATTTTCAACCAGATGGCGTGCCCCAAGTCTTCCTCACTTTGGCGTGGAATTGTTTGTTGGGATCCTTTCAGCCGGAAACCATTTTGCTGAGCGGATGGCTGTGAGGAAGTCATGGATGCAGCATAACTTAATCCAATCTTCAAAAGTGGTAGCTCGCTTCTTTGTAGCACTGCACACGAGGAAGGAAATTAACGTGGAGTTGAAGAAGGAGGCAGAATATTTTGGTGATATTGTTATAGTTCCTTACGTGGATAACTATGACCTTGTTGTGCTGAAAACGGTGGCCATCTGTGAATACGGGGTTCGCACAGTTTCTGCGGAGTATATCATGAAGGGAGATGATGACACTTTTATAAAAGTTGATGATGTTATGACTCGAGTAAGGAATGTTCCATATTCTATGAGCTTTTATATCGGGAACATCAATTACCGCCACAGACCCATGCGCCATGGTAAATGGGCCGTGACATATGAGGAGTGGCCAGAAGAGGAATACCCACCCTATGCTAATGGACCGGGTTATATTTTGTCTTCTGATATTGCAAGCTACATAGTATCTGAATTCGAGGAGCATAAATTAAGGTTGTTTAAAATGGAAGATGTGAGTATGGGAATGTGGGTAGAACAATTTAACAGAACGAAACCAGTATACTACTTTCATAGCTTGAGGTTCTGCCAGTATGGTTGTGTAGAAGGCTATGTCACTGCCCATTACCAATCGCCTAGGCAGATGATGTGCCTGTGGGATAAATTGCAGATGCAGACAATTCCTGAGTGCTGCAACATGAGATAA 1893 0.4712 MNYCQQEIERRSCHQPEIDYPQAPKPEMKRGRIGKLDTLVSFTRQRSTQIFIVLGFFYILVVFLEIPFVFRTTQERPFRLPPLVRPPNGVVSGLTLNDAAFDSFLYQSACRLGRVLWAELKSGNVQAPVSKLDNKSRPCPESISVSGPEFFSRGRSMVIPCGLTLGSYVTVVGEPLRAQRKKWQFMMELQGLTTVEGEEPPRVLHFNPRLRGDWSGKPVIELNTCYRMHWGTAMRCDGWKSRAGEDTVDGLVKCEKWIRGDDGDRHAVESKAEWWLKRLIGRTKRVAVDWPFPFSVNKLFVLTLSAGLEGYHIYVDGRHVTSFPYRTGFTLEDATGLILSGDISVRSVFAASLPLVHPNISSQQHLEFSTRWRAPSLPHFGVELFVGILSAGNHFAERMAVRKSWMQHNLIQSSKVVARFFVALHTRKEINVELKKEAEYFGDIVIVPYVDNYDLVVLKTVAICEYGVRTVSAEYIMKGDDDTFIKVDDVMTRVRNVPYSMSFYIGNINYRHRPMRHGKWAVTYEEWPEEEYPPYANGPGYILSSDIASYIVSEFEEHKLRLFKMEDVSMGMWVEQFNRTKPVYYFHSLRFCQYGCVEGYVTAHYQSPRQMMCLWDKLQMQTIPECCNMR 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00731 630 CDD GLECT 159 349 IPR001079 GO:0030246
Vian1g00731 630 FunFam Hydroxyproline O-galactosyltransferase 375 618 - -
Vian1g00731 630 FunFam Hydroxyproline O-galactosyltransferase GALT2 265 349 - -
Vian1g00731 630 SUPERFAMILY Concanavalin A-like lectins/glucanases 157 349 IPR013320 -
Vian1g00731 630 Gene3D - 274 349 - -
Vian1g00731 630 Pfam Galactosyltransferase 397 577 IPR002659 GO:0006486|GO:0016020|GO:0016758
Vian1g00731 630 Gene3D - 153 248 - -
Vian1g00731 630 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 319 580 IPR002659 GO:0006486|GO:0016020|GO:0016758
Vian1g00731 630 SMART Gal_bind_lectin_2 159 350 IPR001079 GO:0030246
Vian1g00731 630 Gene3D - 379 628 - -
Vian1g00731 630 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 155 351 IPR001079 GO:0030246
Vian1g00731 630 Pfam Galactoside-binding lectin 156 349 IPR001079 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00731 Vian-Chr1 7538954 7542766 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g00731 25 630 Glycosyltransferase AT1G74800 59.821 0.0 792
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00731 K20843 - gmx:100800292 1044.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g00731 1 7538954 7542766 Vian1g00731 1 7538954 7542766 ECH
Vian1g00731 1 7538954 7542766 Vian4g00793 4 10421076 10428988 PCT