Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00533 ATGGGAACTAGGGCAATGGCATCTGGCAAGTTTGATCCACCTTCTAGTAGCCCAGATAGACCATTGTACCCTGGGCAACGTGGATCCCACATAACTGCTTCATTAGATAGATCAGGTAGCTTTCGGGAAAGCATGGAAAATTCAGCTCTGTCTTCTCTTTCTAACATGTTAAGAAGCAGTTCTCCAGCAACACGTGGGGAAGTAGAGAACTTCTTCAATTATGTGCATTTTGATCCAAAGTACTTAACACTAGATCATAAGTCTAATCGTCAAGTGGAATATAAGCGACATGTCAATGCTGCTCTTGGAATTTCACCCGATGAATCTCCATCTAGTTCTTCAAAAGGCAAGCTACTGCCATCGCCAGTACCAGAAGACATGAAACGACTCAAGGATATTTTGGGAGCAAGCTCAATGAGGGCGAGGGATCGTGTGAAAATGTTTAGTGAAGCTTTATCAGTATTTCATGAAGTTTTCCCAACTATAACTTTAAAGAAAAGATCTCGAGCTGAAAGTTTCTCTAATGACCGTTCTAATGTCATGTCAAGTGATCGCCCAGTCTTGGGGTCAAGCATGGGTAAGGGTGGTGTTCAAGGTCATCCTGTGACAGGTGGTTTTGAACTTGAGCAGCAAAAGTCAGAAGAACGAACCAAAAGTGTTGTTCCAAACAAGCGTACTCGAACTTCTATGGTTGATGTTAGGATGGATGTGAGGACTAATTCTCTTGTCAGGCCATCAGGCCCAGTTGACAGAGACAAGGAAAAGTCACGGATTACCAGCAATGGTGCAGTTCAGAGTGAAGAACGAACCTTACCTATTGTTGGTGATGGTTGGGAAAAGACAAAAATGAAGAAGAAGCGTTCCTGCATCAAACTAGATGGTTCTCCAAGTACAACATTGACTAAACCTGTTAACACCTTCCAAGAAACTAAACAGGGAATGCAACAAAGACTTGTTACTGATTCTCGGTCAAAATTGAGTAATGATTCTCATTCTTTTAGGTCAGGAGTTTCCAATGGAACTGTTGGGGCTGGAAAATCAGATGGTGTCTCTCAACAAGCTGGGTTGGGCATACGAGCCTCTACCCCCAGAAACAACCAATATAACAATTCCCCTGTCAATGATAGGCGAGGTCGCCCTGTTGGTTCAGACAAGGAAAGGGTGAATTTCAGAGCTGTAAACAAGGCAACTGCACGTGATGAGTTTAATTCAGCCAGTCCTACTGCTAGTGCAAAAATGAATACGGCTATTCGGGCTCCACGGTCTGGTTCAGGAGTTGCCCCCAAGTTGTCACCAGTTGTCCATAGAGCAGCTGTTCCTAACGATTGGGAACTCTCTCACTGTGCTACGAAGCCACCTGCTGCTGCTAACAATCGCAAGCGTGTGGCTTCTGCAAGGTCATCTTCCCCGCCTGTTGTACCCTGGCAGAGGCCACAAAAGAGCTCTCGCACTGCCAGAAGAACAAATTTCATGTCTATTGTTTCAAACAATGATGAAGCTCCAGCTTTAGATACTGCATCTGATGTTGCTGGTAATGATCTGGGGTTAGGATTTTCCAGACGCTTGGCTGGCAGTTCTATCCAGCAAATTAAATTAAAAGCTGATCCTTCATCTTCAGCTGCCTTATCTGAAAGTGAAGAGTCAGGGGTGGCTGACACTAAACCAAAAGAAAAGGGTAGGAAGCCGGAAGAGATAGATCAGAAATCTGGACAAAACGTTCAAAAGGTGTCTAACTTGGTATTACCGACAAGAAAGAATAAGCTTGTTTCTGAAGAACATGGAGATGGTGTTAGGAGGCAAGGGAGGACTGGACGCAGTCTTACTGCCACAAGGTCACTAATGCCAATGACATCTGAGAAGCTTGGGAATATTGGAACTGCAAAGCAACTTAGAAGTGCAAGACTATCTGATAAGAATGAAAGCAAGGCAGGTCGTCCACCATCCAGGAAACTTTCTGATCGCAAGGCCTATGCACGTCAAAAGCCTACTATTAATGCAGCCACAGATTTTTTTGTTGGGTCAGAAGATGGACATGAAGAGCTGCTGGCTGCTGTAAAGGGTCTTATCAACTCTGCTCATACTTTTTCCAGCCCCTTCTGGAGGCAGATGGAGCCTTTCTTCAGTTTGATAACTGAGGAGGATATTTCTTACTGGAAGCAAAAGATAAATCTTGAATCAAGCACGCCTATGCCAACTCCCATTCCTTCAAATATAGATGGCTGCGAAACCATTGTCAATGGATATGGGTTGACGGCCTGTGAAAGAGATTCTGGATCTGATGCTCAATGGAATGCTGGAGTTATTTCAGAACAGTTGCAACTATCTAAGGGAGGTCATAATATGATTCCTCTGTGTCATAGGCTTATAGCTGCTTTAATCTCAGAGGAGGAGTGTAGTGGTGGAAGTGAACAATTCAAGTTTGATGCTTTCGATCCTGAATTTGACCCTGACGGGCAATCAGAATTGAGTGGTTTGGATTACCACTCGGGAACAAATTTTCAGTTTGCTTGTCATTCTGCTTCTAATGGTTATAGGATTATAGACAAGCCACAACATGATGTAACTCATAGTGATATCATTGGTATTCCTCCAACTGGGTTGAATTCAAGCTTTGGTAAATCTGTAAATGGTTTTCTCCACGATAAAGCATCAATGTCTAGCTTTACCGGTTCAGAGATGCAATATGATAGTTTGGGTATAAATGATAAGATTCTCTTGGAGCTTAAAAGCATTGGAATTGCCCCGGTTCCTGAGCCTGATATGTTGCAAACAGATGACGAGGGAATATTGGAGGATATTACTAAGTTGGAGGAGCTTTACCAAGGGCAGATTTCAAAGAAGAAAAGCTTGCTAGATGGATTGTTCAGAGTTGCCTCAGTGGATAAAGAACTTCAAGAAAAGGACTTTGAGCAACGTGCTCTAGATAAACTTGTACTGATGGCTTATGAGAAGTACATGGCTAGTTGGGGCCCTAGTCCCTCTGGTGGGAAAAATACGAGCAACAAAATGGCCAAGCAAGCTGCTTTGGGATTTGTCAAACGAACATTGGAGCGATGCCATCAATTTGAAGAAACTGGCAAGAGCTGCTTCAGTGATCCTTTATTCAAGGATATGTTCCTTGCTGAATCTTCGAAACCTCATCTTTCTTCCCTTTCCGTTGAAGCAAGAACAGCTTCTATGGGTTCACAACAGAGTCCATCGCAGTTTAGTCAGAATATGGATAATCATGACCTCCATTCATCAGATATGCTTCCTGCTTTAAATCATTCATCTGACCAAACTAGTGGGAAGGAAGATCTCTGGTCAAACAGAGTGAAGAAGAGGGAATTGTCCCTTGATGATGTGGGTGGTACTCCTGGTCTTTCTAGTGCTTCAGGCATTGGAAGTTCTGTAACAAGCAGTGCCAAAGGAAAGAGGAGTGAGAGAGATAGAGATGGAAAGGGGCACAGCCGGGAGGTACTATCCAGAAATGGAACCACAAAAGTTGGTAGGCCAGCATCATCCAGTGCTAAGGGTGATAGAAAATCCAAAACAAAGCCTAAGCAGAAAGCAACTCAGAATTCAGTTTCTGTGAATGGCCTCCTTGGGAAGTTATCAGAACAACCAAAACCAGCATTATCTTCTACTCCAAAGTCTAATGAAATGCCTACAACTAGCAATACGAAGGAAAAGGATGAGTTTGGCTTGGGTGGATTGGATGATCACGAGCCTATTGATTTGTCCAACCTGCAACTACCTGGAATGGATGTACTTGGTGTTGGTGATGACCAAGGTCAGGATCTTGGTTCATGGTTGAATATTGATGATGATGGATTACAAGATCATGATGACTTTATGGGCGGCCTTGAAATTCCAATGGACGATCTCTCGGACTTGAATATGATAGTTTGA 3891 0.4338 MGTRAMASGKFDPPSSSPDRPLYPGQRGSHITASLDRSGSFRESMENSALSSLSNMLRSSSPATRGEVENFFNYVHFDPKYLTLDHKSNRQVEYKRHVNAALGISPDESPSSSSKGKLLPSPVPEDMKRLKDILGASSMRARDRVKMFSEALSVFHEVFPTITLKKRSRAESFSNDRSNVMSSDRPVLGSSMGKGGVQGHPVTGGFELEQQKSEERTKSVVPNKRTRTSMVDVRMDVRTNSLVRPSGPVDRDKEKSRITSNGAVQSEERTLPIVGDGWEKTKMKKKRSCIKLDGSPSTTLTKPVNTFQETKQGMQQRLVTDSRSKLSNDSHSFRSGVSNGTVGAGKSDGVSQQAGLGIRASTPRNNQYNNSPVNDRRGRPVGSDKERVNFRAVNKATARDEFNSASPTASAKMNTAIRAPRSGSGVAPKLSPVVHRAAVPNDWELSHCATKPPAAANNRKRVASARSSSPPVVPWQRPQKSSRTARRTNFMSIVSNNDEAPALDTASDVAGNDLGLGFSRRLAGSSIQQIKLKADPSSSAALSESEESGVADTKPKEKGRKPEEIDQKSGQNVQKVSNLVLPTRKNKLVSEEHGDGVRRQGRTGRSLTATRSLMPMTSEKLGNIGTAKQLRSARLSDKNESKAGRPPSRKLSDRKAYARQKPTINAATDFFVGSEDGHEELLAAVKGLINSAHTFSSPFWRQMEPFFSLITEEDISYWKQKINLESSTPMPTPIPSNIDGCETIVNGYGLTACERDSGSDAQWNAGVISEQLQLSKGGHNMIPLCHRLIAALISEEECSGGSEQFKFDAFDPEFDPDGQSELSGLDYHSGTNFQFACHSASNGYRIIDKPQHDVTHSDIIGIPPTGLNSSFGKSVNGFLHDKASMSSFTGSEMQYDSLGINDKILLELKSIGIAPVPEPDMLQTDDEGILEDITKLEELYQGQISKKKSLLDGLFRVASVDKELQEKDFEQRALDKLVLMAYEKYMASWGPSPSGGKNTSNKMAKQAALGFVKRTLERCHQFEETGKSCFSDPLFKDMFLAESSKPHLSSLSVEARTASMGSQQSPSQFSQNMDNHDLHSSDMLPALNHSSDQTSGKEDLWSNRVKKRELSLDDVGGTPGLSSASGIGSSVTSSAKGKRSERDRDGKGHSREVLSRNGTTKVGRPASSSAKGDRKSKTKPKQKATQNSVSVNGLLGKLSEQPKPALSSTPKSNEMPTTSNTKEKDEFGLGGLDDHEPIDLSNLQLPGMDVLGVGDDQGQDLGSWLNIDDDGLQDHDDFMGGLEIPMDDLSDLNMIV 1296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00533 1296 MobiDBLite consensus disorder prediction 31 46 - -
Vian1g00533 1296 MobiDBLite consensus disorder prediction 533 656 - -
Vian1g00533 1296 MobiDBLite consensus disorder prediction 242 263 - -
Vian1g00533 1296 MobiDBLite consensus disorder prediction 1099 1113 - -
Vian1g00533 1296 MobiDBLite consensus disorder prediction 1218 1233 - -
Vian1g00533 1296 MobiDBLite consensus disorder prediction 1053 1235 - -
Vian1g00533 1296 MobiDBLite consensus disorder prediction 319 384 - -
Vian1g00533 1296 MobiDBLite consensus disorder prediction 1202 1217 - -
Vian1g00533 1296 MobiDBLite consensus disorder prediction 401 428 - -
Vian1g00533 1296 MobiDBLite consensus disorder prediction 1 46 - -
Vian1g00533 1296 MobiDBLite consensus disorder prediction 569 584 - -
Vian1g00533 1296 MobiDBLite consensus disorder prediction 103 124 - -
Vian1g00533 1296 MobiDBLite consensus disorder prediction 1136 1154 - -
Vian1g00533 1296 MobiDBLite consensus disorder prediction 461 487 - -
Vian1g00533 1296 MobiDBLite consensus disorder prediction 633 656 - -
Vian1g00533 1296 MobiDBLite consensus disorder prediction 401 417 - -
Vian1g00533 1296 MobiDBLite consensus disorder prediction 319 376 - -
Vian1g00533 1296 MobiDBLite consensus disorder prediction 603 632 - -
Vian1g00533 1296 MobiDBLite consensus disorder prediction 586 600 - -
Vian1g00533 1296 PANTHER OS05G0107300 PROTEIN 7 1296 - -
Vian1g00533 1296 MobiDBLite consensus disorder prediction 169 199 - -
Vian1g00533 1296 MobiDBLite consensus disorder prediction 549 568 - -
Vian1g00533 1296 MobiDBLite consensus disorder prediction 1053 1098 - -
Vian1g00533 1296 MobiDBLite consensus disorder prediction 452 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00533 Vian-Chr1 5048539 5057164 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00533 - - gmx:100805358 2183.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g00533 1 5048539 5057164 Vian1g00533 1 5048539 5057164 ECH
Vian1g00533 1 5048539 5057164 Vian4g00323 4 3582515 3593516 PCT