Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00530 ATGGATAAAGATGCTAGGGTGGAAGAGACTGTTGATTTGCGAACCAATGTGGAGTTAGTGAGATCAGTCTCTGATAAGCACCATGATCTTTTAAGGCCATCTGCTCGGAACTATTCAAGAGGACAAGCAACAGATCCAGGTGGCCGTGGAAAGGGAAAGTATGTCTTAATTAGAGACCCAGAGGACTTCCAAAATGGAATTTATGATAAGCCCCTTCCATTTTATGGATGTGGAATCGGATGGTTCTCGCATTGGTGTGCTCTGTAG 267 0.4419 MDKDARVEETVDLRTNVELVRSVSDKHHDLLRPSARNYSRGQATDPGGRGKGKYVLIRDPEDFQNGIYDKPLPFYGCGIGWFSHWCAL 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00530 88 PANTHER 60S RIBOSOMAL L18A-LIKE PROTEIN 45 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00530 Vian-Chr1 5020930 5023915 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00530 - - gmx:100795083 160.999
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g00530 1 5020930 5023915 Vian1g00530 1 5020930 5023915 ECH
Vian1g00530 1 5020930 5023915 Vian4g00327 4 3624271 3629213 PCT