LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vian1g00525	ATGTCTGATGCCGAAGAGCATGCAGATGCAGCAGACTATCCCAATGGCGAATCTCCTCCAAAGCATCCAAAGAGGTTCAGAGACAGATCTAAGGAGATGTTGTCCAAAAAAGCTGTGCACACCAAGCAAATGCTATCCGAACAGGCTGTGAAGATTGCCAAACAAGCTGAGGAACACGAGAGCTGTCATCTGGGTGTTGAAAAATCCAATGGGTTTATTGTGGGGAGTTTGACCCTTTGCATAGTCAATATTGAACAACCTGCTTTAATTGTTGGTCATTCTCACGTTTGTGTTCAGGTGACGCATCTCGTTGGCGTCCTCGGTTTTGGGGGGTTTTGCTTCCTTTTAGGGGCAAGACCCCAAGACATTCCCTATGTATATTGTGTGTTCTACGTCATCTTTGTTCCTCTGCGTTGGATATACTACAGGTTCAAGAAATGGCATTACTATCTGCTGGATTTTTGCTATTATGCCAATACAATATTCTTGGTTGATCTTCTTTTTTACTCAAAAAATGAGAAGCTTTTCATGGTTTGTTTTGCTTTTGCTGAGGGGCCCTTAGCATGGGCTTTGATTGTTTGGCGCTGCAGCTTGGTTTTCAGTTCTGTTGACAAAATTGTCAGTGTTCTTATCCATCTTTTACCTGGTTTGGTTTTCTTTACTATTCGATGGTGGGATCCTGCAACCTTCGAAGCCATGCATCCAGAGGGGACTGCTAGAAGACCTACGTGGCCTTACATTGAAGACAAATCATTTCTCTGGACATGGCTGTTTCTGGTACCCTTGGTAGCTTACACATTGTGGCAGGTTCTGTACTTCCTCATCGTCAATGTTTTGCGTAGGCAAAGGTTTTTAAGAGATCCCGAAGTGATGACTTCCTACAGGGAACTCTCAAAAAAGGCTCAAAAAGCAAACAACATATGGTGGCGTTTAAGTGGGTTGCTAGGGGATCAAAATCGCATGCTAATGTACATTTTTCTTCAAGGAATATTTACAGTGGCAACCATGGCACTGGCTGTGCCAATATTCTTGTCATATGAGTTGCATGTAGTTTTCCAGATACTGAAGGTTTCAGCCGCAATATGGAATGGTGGAAGTTTTCTGTTAGAAGTAATGCCAAGACAGGCAATTCTTAAGGAGAAAAAGAAATCAGAGATGCAACCTGTTGAAGCTCAATCCAACACTAACACTGATGGAAAAATGTTATCAAGTTAA	1215	0.4247	MSDAEEHADAADYPNGESPPKHPKRFRDRSKEMLSKKAVHTKQMLSEQAVKIAKQAEEHESCHLGVEKSNGFIVGSLTLCIVNIEQPALIVGHSHVCVQVTHLVGVLGFGGFCFLLGARPQDIPYVYCVFYVIFVPLRWIYYRFKKWHYYLLDFCYYANTIFLVDLLFYSKNEKLFMVCFAFAEGPLAWALIVWRCSLVFSSVDKIVSVLIHLLPGLVFFTIRWWDPATFEAMHPEGTARRPTWPYIEDKSFLWTWLFLVPLVAYTLWQVLYFLIVNVLRRQRFLRDPEVMTSYRELSKKAQKANNIWWRLSGLLGDQNRMLMYIFLQGIFTVATMALAVPIFLSYELHVVFQILKVSAAIWNGGSFLLEVMPRQAILKEKKKSEMQPVEAQSNTNTDGKMLSS	404

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vian1g00525	404	PANTHER	OS01G0585100 PROTEIN	24	396	IPR021261	-
	Vian1g00525	404	MobiDBLite	consensus disorder prediction	382	404	-	-
	Vian1g00525	404	MobiDBLite	consensus disorder prediction	1	33	-	-
	Vian1g00525	404	MobiDBLite	consensus disorder prediction	388	404	-	-
	Vian1g00525	404	Pfam	Protein of unknown function (DUF2838)	99	208	IPR021261	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vian1g00525	Vian-Chr1	4971948	4975610	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vian1g00525	-		-	gmx:100791853	653.284

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Vian1g00525	1	4971948	4975610	Vian1g00525	1	4971948	4975610	ECH
	Vian1g00525	1	4971948	4975610	Vian4g00329	4	3637929	3640686	PCT