Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00519 ATGAAGGAACCCACCTGCCCACAAAGGAGAAGAACTCCTTCCTTCTCCTCTTCTCTCCTCGACGCCATTTGCCATTCCATTGACCAGTCAAAATCCAATCTTCATCAGGATCAACCGTCTTCTCTCTTCGATCACAATACGCACTCTTTCACCTTTGAAAAAGGTGGCAATAGAGAGAGAATGAATCTTCGCCGGGCGGTCATGCTGGAGGATTGGATGGAGAAGCATAGTTCTCATTCCCGTTCCCAAAGTTCTCAGTTTCTGAACTGCAGTTCAAGCTCCTCAGAATGCAGCTCTGGGGGGAAATTTTCCTCTTCGGAAACCGACACGACAACCTTGAAGAAACAAAGACCGAGACCCACATCGGAGAAGAAGAAACAAGACCATAGGGTTTCCGAGAAGCAGAATAAAGAGGGTGGTTTCGCAAGGACCAAGTTGCGGGCTTTGAAAATTTACGGCGAATTGAATCAGAGAGTGAAGCAACCCATTTCACCGGGGAGTAGAATCGCTAGCTTCCTTAGCTCCATCTTCAACTCCCAGAACGTGAAGAAAGCCAAAATGTGTTACGTTGGGGCTGTTGAAGATGTTAGCTTTGAACACAAATCAAAGTCCCCGTGTTTCTCTTCCACTCCTTCTTCGTTCTCGAGAAGGTCTTGCATGAGCAAAACATCCTCTTCGGCTAAAAAATCCAACTCCAATGGGGTCAAAAGATCCGTGAGGTTTTACCCCGTTAGCGTAATCCTAGGCGAGGATTCTGAACCACAACCTAGTTATCACAAATGTAGCAACATTTATGAGAGCGAGCCTAATTTCACTGTGAGGAAGATCACCAGAAATTCTTCGATAAAGGAGCTGAAGAACACTGTTCGGGGAGAAGAAAATGGAGCTGAAGAAGCAGCAGCGCGTGGTTTTGTAAAAGGTTATCGAAATTCTGGTAAGGGTGAATTTGATTTTAGAGGCTTTTATAGAAATGAGGATGACGACGACGACGACGATGAAGAAGACGATGCGAGTTGTTCGAGTTCAGATTTGTTTGAGCTGGATCATCTTATTGGAGCTGCAAGGTACCAAGAAGAACTTCCTGTCTATGAAACTACCAATTTGGAAACAAATAAAGCCATTGCCAGTGGTCTATGTTTGTAG 1143 0.4506 MKEPTCPQRRRTPSFSSSLLDAICHSIDQSKSNLHQDQPSSLFDHNTHSFTFEKGGNRERMNLRRAVMLEDWMEKHSSHSRSQSSQFLNCSSSSSECSSGGKFSSSETDTTTLKKQRPRPTSEKKKQDHRVSEKQNKEGGFARTKLRALKIYGELNQRVKQPISPGSRIASFLSSIFNSQNVKKAKMCYVGAVEDVSFEHKSKSPCFSSTPSSFSRRSCMSKTSSSAKKSNSNGVKRSVRFYPVSVILGEDSEPQPSYHKCSNIYESEPNFTVRKITRNSSIKELKNTVRGEENGAEEAAARGFVKGYRNSGKGEFDFRGFYRNEDDDDDDDEEDDASCSSSDLFELDHLIGAARYQEELPVYETTNLETNKAIASGLCL 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00519 380 MobiDBLite consensus disorder prediction 95 111 - -
Vian1g00519 380 Coils Coil 282 302 - -
Vian1g00519 380 MobiDBLite consensus disorder prediction 31 57 - -
Vian1g00519 380 MobiDBLite consensus disorder prediction 112 140 - -
Vian1g00519 380 MobiDBLite consensus disorder prediction 31 50 - -
Vian1g00519 380 MobiDBLite consensus disorder prediction 205 232 - -
Vian1g00519 380 MobiDBLite consensus disorder prediction 319 340 - -
Vian1g00519 380 PANTHER PROTEIN BIG GRAIN 1-LIKE A-RELATED 3 379 IPR039621 GO:0009734
Vian1g00519 380 MobiDBLite consensus disorder prediction 95 140 - -
Vian1g00519 380 MobiDBLite consensus disorder prediction 324 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00519 Vian-Chr1 4915162 4916304 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00519 - - gmx:100803228 508.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g00519 1 4915162 4916304 Vian9g00327 9 3103569 3104843 ECH
Vian1g00519 1 4915162 4916304 Vian4g02098 4 37823774 37824952 ECH
Vian1g00519 1 4915162 4916304 Vian7g00553 7 13176969 13178099 ECH
Vian1g00519 1 4915162 4916304 Vian1g00519 1 4915162 4916304 ECH