Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00515 ATGGAAGGAGACACATTCTCTGGTCTCGGCAACGGTACACAGATTGATAACAAGATCTTGCAAACGTTTAAGAAAAGCTTTGTTCAAGTCCAGGACATCTTGGATCAGAACCGGGTACTCATCAATGAGATAAACCAGAATCACGAGTCCAAGGTCCCTGACAATCTCAGCAGAAACGTTGGCCTTATTAGGGAGCTTAACAACAACATCAGAAGAGTGGTTGACCTTTATGCGGATCTTTCAAGCTCCTTTACCAAATCCATGGAGGTTTCTTCCGAAGGGGATTCCAGTGGTGCTGTGAAATCTGACGGTAAAGCTGGCCACAAGCGACACAGGCCTCTTTAG 345 0.458 MEGDTFSGLGNGTQIDNKILQTFKKSFVQVQDILDQNRVLINEINQNHESKVPDNLSRNVGLIRELNNNIRRVVDLYADLSSSFTKSMEVSSEGDSSGAVKSDGKAGHKRHRPL 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00515 114 PANTHER PROTEIN ELF4-LIKE 4 12 112 IPR040462 GO:0042753
Vian1g00515 114 Pfam Early Flowering 4 domain 14 95 IPR009741 -
Vian1g00515 114 MobiDBLite consensus disorder prediction 87 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00515 Vian-Chr1 4886893 4887237 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00515 - - gmx:100817992 222.631
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g00515 1 4886893 4887237 Vian1g00515 1 4886893 4887237 ECH
Vian1g00515 1 4886893 4887237 Vian4g00339 4 3760849 3761193 PCT