Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00431 ATGGCCTCTTGGAAGAAGACCATCACAACACCCTTCAAAAAAGCTTGCACCTTTTTCAACAACCAACCGCCAAGGGATCAAAAGAAGTCTCAACCAGATAATTCTCATTCTCATTCTCATCCATTTCCAGACCAAGAGACCCGAGTCATGGATCTGCACGGGGAAGTCATGGCATGTGGCTACGAGGATGTTCAAGTTATGTGGTCTATTCTCGACAAGTCCAAATCCACAAACTGCAATATACCCTCTTCAACCTGA 258 0.4496 MASWKKTITTPFKKACTFFNNQPPRDQKKSQPDNSHSHSHPFPDQETRVMDLHGEVMACGYEDVQVMWSILDKSKSTNCNIPSST 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00431 85 MobiDBLite consensus disorder prediction 16 49 - -
Vian1g00431 85 PANTHER OS01G0778500 PROTEIN 1 77 - -
Vian1g00431 85 MobiDBLite consensus disorder prediction 29 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00431 Vian-Chr1 3986158 3986460 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00431 - - vun:114177221 145.976
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g00431 1 3986158 3986460 Vian1g00431 1 3986158 3986460 ECH
Vian1g00431 1 3986158 3986460 Vian4g00408 4 4686430 4686735 PCT