Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00378 ATGAAGAGCGAAGGGATTCTCCCGAGAGAGGTTCCCGTGGTGGACTTCTCAGGGGAGAGAGCGGAAGTGGCGAAGGTGATCGTGAAAGCGTGCGAAGAATACGGTTTCTTCAAAGTGATAAACCACGGTATCAGCAAGGAAGTTATAGCGAAATCTGAAGAAGCAGGTTTCGGTTTCTTTGGGAAACCGATGGTGGAAAAGAAAGTGGCGGTACCTGCATATGGGTGCAAGAACATAGGTGTCAATGGAGACATGGGTGAGGTCGAGTACCTTCTCCTCAGTGCCACCACTGACTCCATTGCTCACATTTCCAAAACCATATCCACTGACCCATTAAATCTCAGGAAAAGCTTGAGTGCATACACAGAAGCAGTGAAAGAACTAGCATGTGAGATATTGGAGGTGATGGCAGAGGGGCTGGGGGTCCCGGACACTTGGGTTTTCAGCAGATTGATAAGGGATGGTGAAAGTGACTCAGTGCTGAGACTCAATCACTACCCACCTATAATTAACAGAGATAAGGACAAGTCATCACAAATTACCAAGGTTGGGTTTGGGGAGCATTCTGACCCTCAGATCCTTACCATTCTCCGATCCAACGACGTCGGAGGCCTCCAAATTTCTCTTCCAGATGGGGTATGGATCCCAGTCACACCTGACCCCTCTGCATTCTATGTCAACGTCGGTGATGTACTACAGGTTATGACAAATGGAAGATTTGTGAGCGTGAGACACAGGGCAATGACGAACTCATACAAGTGTAGAATGTCAGTGGCATATTTTGGGGCTCCACCTCTGCATCAAACCATTGTTGCTCCCTCAGTTATGGTGACACCTCAGAGGCCCTCTCTCTTCCGACCATTCACTTGGGCCGAATACAAGAAAGCCACATATTCTCTCAGGCTTGGAGACACACGCCTTCAGCTTTTCAGAAACTGCAAACGCTGA 948 0.4842 MKSEGILPREVPVVDFSGERAEVAKVIVKACEEYGFFKVINHGISKEVIAKSEEAGFGFFGKPMVEKKVAVPAYGCKNIGVNGDMGEVEYLLLSATTDSIAHISKTISTDPLNLRKSLSAYTEAVKELACEILEVMAEGLGVPDTWVFSRLIRDGESDSVLRLNHYPPIINRDKDKSSQITKVGFGEHSDPQILTILRSNDVGGLQISLPDGVWIPVTPDPSAFYVNVGDVLQVMTNGRFVSVRHRAMTNSYKCRMSVAYFGAPPLHQTIVAPSVMVTPQRPSLFRPFTWAEYKKATYSLRLGDTRLQLFRNCKR 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00378 315 SUPERFAMILY Clavaminate synthase-like 9 304 - -
Vian1g00378 315 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 156 264 IPR005123 -
Vian1g00378 315 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 11 296 - -
Vian1g00378 315 Gene3D - 2 301 IPR027443 -
Vian1g00378 315 Pfam non-haem dioxygenase in morphine synthesis N-terminal 11 70 IPR026992 -
Vian1g00378 315 FunFam Gibberellin 2-beta-dioxygenase 2 1 301 - -
Vian1g00378 315 Pfam 2OG-Fe(II) oxygenase superfamily 158 262 IPR044861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00378 Vian-Chr1 3343006 3345964 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g00378 2 311 Glycosyltransferase AT5G59530 29.429 1.93e-30 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00378 K04125 - gmx:100816206 538.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g00378 1 3343006 3345964 Vian1g00378 1 3343006 3345964 ECH