Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00373 ATGCTTATCTTCAGTCCTGTTACTCCCGGTCAGGTGTCGTTCTTGCTCGGGATCACTCCGGTCGTTGTGGCATGGATATATTCGGAGATATTGGAGTATCGGAAAAGCTCTGTCTCGTCCAGAGCTGGGCAGTCGGATATCAACTTGGTTGAAATGGGTAGTGATGCTGTTAAAGATGAAGACAAAGCAGTTTTATTGGAGGGAGGAGCTCTACAATCGGGATCCCCGAGGGCGCGGAGCATAACTGCCTCACCATCCATTATCCGATTCCTTTTGATGGATGAATATTTCCTTCTAGAAAACCGTTTGACACTCAGAGCGATGTCTGAATTTGGTCTCCTTTTGGCTTACTTTTATCTGTGTGACCGCACGGATTTCTTTGCCTCGTCAAAAAAGAGTTACAATAGGGATCTCTTCCTATTTCTCTATTTTCTCCTCATAATAGTTTCGGCAATGACTTCCTTTAAGAAACATCAAGACAAGTCACCATTTTCTGGGAAATCCATCCTTTATTTAAATAGACACCAGACTGAAGAATGGAAAGGCTGGATGCAGGTTTTGTTTTTGATGTACCATTACTTTGCTGCATCTGAAATCTACAATGCAATCCGTTTGTTCATTGCCGCATATGTTTGGATGACTGGATTTGGGAACTTCTCATATTATTATGTTCGTAAAGATTTTAGTCTGGCTAGATTTGCTCAGATGATGTGGAGGCTTAATTTCTTTGTGGTGTTCTGTTGTATTGTACTCAACAACAGTTACATGTTATACTACATCTGCCCCATGCACACACTTTTCACTCTTATGGTTTATGGGGCACTTGGTATTCTCAACAAGTACAATGAGATTGGGTCAGTCATTGCTGTGAAAATCATTGCTTGCTTCTTGGTTGTTATCTTGGTATGGGAGATACCTGGAGTCTTTGAATGGCTTTGGAGTCCATTTACTTTCCTTCTTGGTTATACTGATCCTAATCCTGCCAAATCGCATCTTTCCCGCTTGCATGAATGGCATTTTCGCTCAGGGCTTGATCGCTACATATGGATAATTGGCATGATTTATGCCTATTATCATCCAACTGTTGAACGATGGATGGAAAAATTGGAGGAAGCAGAAATCAAGCGCAGAGTATCAATCAAAGCAGCTGTTGTGCTGATATGCTCATCGGTGGGTTATTTTTGGTTTGAGCATATATACAAGCTCGACAAGCTTTCATACAATAAATATCATCCTTATACTTCGTGGATTCCCATAACGGTTTACATATGCTTGCGGAATGTCACACAAAGTTTCCGTAGCGGTACTCTGACACTTTTTGCATGGCTTGGGAAGATTACACTGGAGACTTACATCTCCCAGATCCATATCTGGTTAAGGTCAGGTGTTCCAGATGGACAACCCAAATTGTTGCTTTCCCTGATCCCAGACTACCCAATGTTGAACTTCATGCTTACTACTTCCATATATGTTGCAATTTCCTATAGGCTTTTTGACCTGACAAATGTACTCAAGGTGGCATTTGTGCCCAGCAAAGACGACAAGCGTCTTTTACACAATTTAATTACAGCAACAACAATCTCAGTTGTTTTATATTCTTTGTCCCTTGGCTTCCTTAGGGTACCTCAAATGTTGGTTTAA 1641 0.4132 MLIFSPVTPGQVSFLLGITPVVVAWIYSEILEYRKSSVSSRAGQSDINLVEMGSDAVKDEDKAVLLEGGALQSGSPRARSITASPSIIRFLLMDEYFLLENRLTLRAMSEFGLLLAYFYLCDRTDFFASSKKSYNRDLFLFLYFLLIIVSAMTSFKKHQDKSPFSGKSILYLNRHQTEEWKGWMQVLFLMYHYFAASEIYNAIRLFIAAYVWMTGFGNFSYYYVRKDFSLARFAQMMWRLNFFVVFCCIVLNNSYMLYYICPMHTLFTLMVYGALGILNKYNEIGSVIAVKIIACFLVVILVWEIPGVFEWLWSPFTFLLGYTDPNPAKSHLSRLHEWHFRSGLDRYIWIIGMIYAYYHPTVERWMEKLEEAEIKRRVSIKAAVVLICSSVGYFWFEHIYKLDKLSYNKYHPYTSWIPITVYICLRNVTQSFRSGTLTLFAWLGKITLETYISQIHIWLRSGVPDGQPKLLLSLIPDYPMLNFMLTTSIYVAISYRLFDLTNVLKVAFVPSKDDKRLLHNLITATTISVVLYSLSLGFLRVPQMLV 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00373 546 PANTHER N-ACETYLNEURAMINATE 9-O-ACETYLTRANSFERASE 12 528 - -
Vian1g00373 546 Pfam 10 TM Acyl Transferase domain found in Cas1p 104 516 IPR012419 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00373 Vian-Chr1 3305399 3310679 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00373 K03377 - gmx:100794337 1039.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g00373 1 3305399 3310679 Vian1g00373 1 3305399 3310679 ECH