Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00368 ATGAGGAGCTCACTCTTTGGGTCCTTTTCTATTCTCCATATTCTTATTCTATCATGTATTCTTCTCACACCAACAACTCTTTCCTCTGATGGAGATGGTGACGATGATGGTGATTTGGTGGACCAGATATGCCGAAAGACTCCCTTTTATGATCTCTGCAGCTCCATCTTACATTCAAATCCCTTGGCCCCCAAAAGTGATCCAAAGGGTATGGCCCTCATAATGGTGAACAACATTCAGGAAAATGCTACTGACACACTGTGTTACATTGAAGAGTTGATCAAGCAAACCTCAGATGAACAATTGGAGCAGCAACTGGATTTCTGCGCAGAGTCATACATCCCAGTTGTGAAGTACATTCTCCCACAAGCAGCTGATGCCATAAGCCAAGGTCGATTTGGGTTTGCCAGTTACTGCATAGTTGATGCTCAGAAGGAAGTAAATGCCTGCGACAAGAAATTTTCTGGCTCATCTCAGGCACCCTTAAGTGATAGAAATGACATTATGCAGAAGCTGGTGGATGTGGCTGCAGCCATAGTTAAACTACTATTAAATGGCTGA 561 0.4349 MRSSLFGSFSILHILILSCILLTPTTLSSDGDGDDDGDLVDQICRKTPFYDLCSSILHSNPLAPKSDPKGMALIMVNNIQENATDTLCYIEELIKQTSDEQLEQQLDFCAESYIPVVKYILPQAADAISQGRFGFASYCIVDAQKEVNACDKKFSGSSQAPLSDRNDIMQKLVDVAAAIVKLLLNG 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00368 186 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 37 183 IPR035513 -
Vian1g00368 186 Gene3D Invertase/pectin methylesterase inhibitor family protein 35 184 IPR035513 -
Vian1g00368 186 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Vian1g00368 186 PANTHER PECTINESTERASE INHIBITOR-LIKE 14 184 - -
Vian1g00368 186 Pfam Plant invertase/pectin methylesterase inhibitor 38 179 IPR006501 GO:0004857
Vian1g00368 186 FunFam Invertase/pectin methylesterase inhibitor family protein 35 184 - -
Vian1g00368 186 NCBIfam pectinesterase inhibitor domain 13 183 IPR006501 GO:0004857
Vian1g00368 186 SMART PMEI_2 35 179 IPR006501 GO:0004857
Vian1g00368 186 CDD CIF_like 39 183 IPR034087 GO:0004857|GO:0043086
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00368 Vian-Chr1 3289511 3290071 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00368 - - gmx:100820305 303.908
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g00368 1 3289511 3290071 Vian1g00368 1 3289511 3290071 ECH