Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00364 ATGAATGTCGATAACGGTTCAGAGAGCGCGAAGCTTGACAACTCGTCCATGCAAATGGATTCCGGTGACTCTTCCGATCAAGTAAAAGACAATGAGAAGGAAAAGAAAGAACTCACTGAGACTATGAACAAGCTGCATATTGAAGGATGTTCTTCTGGAAATGGATTTCCTAACTTTCGAAGAAAACCTGTCATCATTATTGTTGTAGGAATGGCAGGGAGTGGGAAAACTACACTCATGCATAGGTTGGTTGCCCATACACATATAAAAAACATCCGGGGTTATGTGGTGAATCTTGACCCTGCCGTCATGACCCTTCCATATGCTTCCAACATCGATATAAGAGACACTGTTAAATACAAAGAAGTCATGAAGCAGTTTAACCTTGGCCCTAATGGTGGAATTTTGACTTCTATGAACTTGTTTGCCACCAAGTTTGATGAGGTAATCTCTATGATTGAGAGACGGGCAGATCAACTTGACTATGTTCTTGTGGACACCCCTGGTCAGATTGAAATATTTACCTGGTCTGCTTCTGGTGCTATCATTACAGAAGCTTTTGCATCCACATTTCCCACTGTAGTGGCCTATGTAGTTGATACACCTCGTTCAGAAGATCCTACAACTTTCATGAGCAACATGTTGTATGCTTGTAGTATCCTCTATAAGACAAGGTTACCTCTCATCCTGACATTCAACAAAGTTGATGTAGCAGCACATCAGTTTGCATTGGAGTGGATGGAGGATTTTGAGGCATTCCAAGCAGCAGCAAGTTCAGATCAGTCATACACATCAACTTTAACTCAAAGCCTTTCTCTTGTGCTAGATGAATTCTACAATAATTTGAAATCAGTTGGAGTTTCTGCTGTTTCTGGTGCAGGAATGGAAGCCTTCTTTAAGGTTGTCGAAGCCAGTGCAGATGAATACATGGACACCTACAAGGCTGATCTTGATAAAAGACGAGAAGAGAAGCAACGTTTGGAGGAAGACCGTAGGAGGGGCGACATGGATAAACTGAGGAGAGACATGGAGAAATCTGGGGGAGAAACTGTAGTTTTGAACACTGGTTTGAAGGACAAAGAGAAAAGTAAAAGTAAAAGTATGATGGATGAGGAAGATGAGGTTGAGGAGGACGAGGTAACGGAAGATGATGAAGATTTGGGGATATATACTGAAGATGATGATGCTATAGATGAGGACGAAGATGAGGAGGTTGATAGGTTCGGCCTGTGA 1233 0.4209 MNVDNGSESAKLDNSSMQMDSGDSSDQVKDNEKEKKELTETMNKLHIEGCSSGNGFPNFRRKPVIIIVVGMAGSGKTTLMHRLVAHTHIKNIRGYVVNLDPAVMTLPYASNIDIRDTVKYKEVMKQFNLGPNGGILTSMNLFATKFDEVISMIERRADQLDYVLVDTPGQIEIFTWSASGAIITEAFASTFPTVVAYVVDTPRSEDPTTFMSNMLYACSILYKTRLPLILTFNKVDVAAHQFALEWMEDFEAFQAAASSDQSYTSTLTQSLSLVLDEFYNNLKSVGVSAVSGAGMEAFFKVVEASADEYMDTYKADLDKRREEKQRLEEDRRRGDMDKLRRDMEKSGGETVVLNTGLKDKEKSKSKSMMDEEDEVEEDEVTEDDEDLGIYTEDDDAIDEDEDEEVDRFGL 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00364 410 MobiDBLite consensus disorder prediction 1 37 - -
Vian1g00364 410 Coils Coil 310 330 - -
Vian1g00364 410 CDD GPN1 64 304 IPR030230 GO:0003924
Vian1g00364 410 FunFam GPN-loop GTPase 1 63 321 - -
Vian1g00364 410 Pfam Conserved hypothetical ATP binding protein 68 306 IPR004130 -
Vian1g00364 410 SMART AAA_5 62 201 IPR003593 GO:0016887
Vian1g00364 410 MobiDBLite consensus disorder prediction 322 347 - -
Vian1g00364 410 PANTHER XPA-BINDING PROTEIN 1-RELATED 67 324 IPR004130 -
Vian1g00364 410 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 65 303 IPR027417 -
Vian1g00364 410 Coils Coil 28 48 - -
Vian1g00364 410 MobiDBLite consensus disorder prediction 1 24 - -
Vian1g00364 410 Gene3D - 63 321 IPR027417 -
Vian1g00364 410 MobiDBLite consensus disorder prediction 355 370 - -
Vian1g00364 410 MobiDBLite consensus disorder prediction 322 410 - -
Vian1g00364 410 MobiDBLite consensus disorder prediction 371 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00364 Vian-Chr1 3262237 3265409 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00364 K24104 - gmx:100797318 640.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g00364 1 3262237 3265409 Vian1g00364 1 3262237 3265409 ECH