Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00331 ATGGGAGCGCCAGAGAAATCACAGGCTAGCACTAATTCGATGCAGCGTGTCAAGGTATATCGTCTAAATGATGAAGGGAAATGGGATGACCAGGGTACTGGTCATGTCACTGTTGATTATCTAGAGCGATCAGAAGAGCTGGGCTTATTTGTTTATGATGAAGACGATAATGAGACCATACTGTTGCATCGCATCAGTTCTGATGATATTTATAGGAAACAAGAAGATACAATCATCTCATGGAGAGATCCAGAATATGCTACAGAACTGGCACTTAGCTTTCAAGAGACTAGTGGTTGCTCTTACATATGGGACCATATTTGCAATGTGCAGAGGAATATGCATTTTAATACATTAAATAATGAGCCATTTCACAGTGTCAATAGTGAACCAAGGGAGTTGCCTGCTGTTGAGCTTTCAACACTTCCTTTGATTTTAAAGACTGTGGTTGACACTGGCTTTGCAGATCAGTTGCGGCTTACAGAACTAATATTAAGTGATCAAGAGTTTTTTCGGAAGCTGATGGAAGTATTCAGAATGTGCGAAGACTTAGAAAATATTGATGGCCTTCACATGATTTTCAAAATAGTCAAAGGGATTGTTTTGCTAAATAGTCCAGCGATTTTTGAGAGAATTTTTTGTGATGACTTTATAGTGGACATTATTGGTGCCCTCGAGTATGATCCAGAGCTTCCCCATGTTCAACATCATCGTAAATTCTTAAAGGAGCATGTTGTTTTTAAGGAGGCTATACCTATAAAAGACCCAGTTGTGCTGTCAAAGATTCATCAGACATATAGAGTTGGTTTTTTGAAGGATGTTGTTCTGGCTAGATTATTGGATGAGGGTATTGGTGCAAATCTTAACTCCATAATACATTCAAACAATGCCTATGTTGTCTCTTCATTAAAGGATGACAGTGCATTCATCCAGGAGTTGTTTGCTAGGCTAAAATCACCCACCACGACTCAAGAATCAAAAAAGAATTTGGTTTATTTCTTGCATGAATTTTGTAGTTTGAGCAAGAGCTTGCAGATGGTCCAGCAGCTTCGGCTTTTTAGGGATCTAATGAACGAAGGCATCTTTGATGTTGTCACTGATGTCTTACAAAGTGAAGACAAGAAGCTTGTGCTAACTGGAACAGATATCCTCATTCTTTTCTTGAATCAAGATCCTAATCTCTTGCGATCCTATTTTGTTCGACAGGAAGGATTTGCCCTTCTAGGACTTTTGGTTAAAGGAATGCTAACAGATTTTGAAGAGAACATGCACTGCCAGTTTCTTGAAATTCTTCGCAATTTATTGGACTCATGCACATTGACTGGATCACAGAGGGACACTATTATTGACATATTCTTTGAGAGGCATTTGGGGCAATTGATTGAGGTTATAACATCATCTTGTCCTTCGGAAATTACTGCTGGTGAAAGTGACAAATCAATAGGTTCTGGGCGAAGAGCTCATTGTCAAAGTGGAACTAAGCCAGAGATACTATCAAACATATGTGAATTACTATGCTTTTGCGTCCTACATCATCCATACAGAATAAAGTGTAACTTTCTTCTTAATAATGTGTTTGAAAAAATATTGCTATTGACACGAAGAGCAGAAAGGTACTTAGTTGTTGGTGCTGTCCGGTTTGTACGAACTATTCTCTCGCGTCATGATGAGCATTTGATAAATTATGTTACTAGGAATAATGTACTCAAACCAATCATTGATGCCTTTGTTTCTAACGGCAATCGCTACAATCTGCTCCATTCTGCTGTTCTGGAGCTTTTTGAGTTTATTAGGAAGGAGAATCTTAAAGCATTGCTGAAATACATAGTTGATTCTTTTTGGGACCAGCTGGTGAAATTTGAGTATTTGGCGTCCATTCACTCACTGAAAGTAAAATATGAGCAGTGTTTGGATAATGGTGGGACAAAAGATGCTGCTACTGTTGTGGACCTTCGTAGACGAAATGATGAGCGTGCTTTGGAGAAAGAAGAAGAACGATACTTTAATGAGGACAGTGATGAGGAGGATATTGCTTCTGCATCTGTTCCGCGGAATCAGAAAGGACACCAGCAACCTAATCTGTCCAATGGAGTTGCTTCAAGCTATTCACAGTTAAGTCCAAGGTCACTGGTTGACTATGAGGATGATGAGGACGATGAAGATTACAAACCACCACCAAGGAAGCAGCCTGAAACTTCTGAGGAAGATGATGGGGTACTGGAGTCTCTCAGGCTGAAGAGGAAGTTGCCTTCAAAAGATAAGGAACCTGAACTTGTGAAGAAACAGAAGTTATCAAAGAATTCTAAATCTAAAGATAGTGTCTTTGCTGCCTTGTGTTCAACATTGAGCCAAGCTGCGCTACCTAGTAAGAAAACGTCAATCAGCATTCAGACGAGTGCTCGAATAGTTGAGGGGAGGATGGGCTCTAGTGAAAATAATCAGGGAGATGTACAAAGTATTTCTAGAAGCAGTTCCGATAATAGCAACACTGCAGGAGAAGACAATCACATAGAGAAAGAGGCTGAAGACTCTAGAAACTTTTCCGATTGCTTGCATGCAAAATCAGATAACATACAATTGGGTGGAGAGGAGCGTCCATTGGTTGCCCCAAAGTCCTCACCAGAGATGGCTGTAAATGGATCGTAA 2646 0.3991 MGAPEKSQASTNSMQRVKVYRLNDEGKWDDQGTGHVTVDYLERSEELGLFVYDEDDNETILLHRISSDDIYRKQEDTIISWRDPEYATELALSFQETSGCSYIWDHICNVQRNMHFNTLNNEPFHSVNSEPRELPAVELSTLPLILKTVVDTGFADQLRLTELILSDQEFFRKLMEVFRMCEDLENIDGLHMIFKIVKGIVLLNSPAIFERIFCDDFIVDIIGALEYDPELPHVQHHRKFLKEHVVFKEAIPIKDPVVLSKIHQTYRVGFLKDVVLARLLDEGIGANLNSIIHSNNAYVVSSLKDDSAFIQELFARLKSPTTTQESKKNLVYFLHEFCSLSKSLQMVQQLRLFRDLMNEGIFDVVTDVLQSEDKKLVLTGTDILILFLNQDPNLLRSYFVRQEGFALLGLLVKGMLTDFEENMHCQFLEILRNLLDSCTLTGSQRDTIIDIFFERHLGQLIEVITSSCPSEITAGESDKSIGSGRRAHCQSGTKPEILSNICELLCFCVLHHPYRIKCNFLLNNVFEKILLLTRRAERYLVVGAVRFVRTILSRHDEHLINYVTRNNVLKPIIDAFVSNGNRYNLLHSAVLELFEFIRKENLKALLKYIVDSFWDQLVKFEYLASIHSLKVKYEQCLDNGGTKDAATVVDLRRRNDERALEKEEERYFNEDSDEEDIASASVPRNQKGHQQPNLSNGVASSYSQLSPRSLVDYEDDEDDEDYKPPPRKQPETSEEDDGVLESLRLKRKLPSKDKEPELVKKQKLSKNSKSKDSVFAALCSTLSQAALPSKKTSISIQTSARIVEGRMGSSENNQGDVQSISRSSSDNSNTAGEDNHIEKEAEDSRNFSDCLHAKSDNIQLGGEERPLVAPKSSPEMAVNGS 881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00331 881 MobiDBLite consensus disorder prediction 802 831 - -
Vian1g00331 881 PANTHER ATP SYNTHASE GAMMA-RELATED 16 800 - -
Vian1g00331 881 MobiDBLite consensus disorder prediction 832 850 - -
Vian1g00331 881 MobiDBLite consensus disorder prediction 683 708 - -
Vian1g00331 881 Gene3D - 10 129 IPR011993 -
Vian1g00331 881 Gene3D - 275 615 IPR011989 -
Vian1g00331 881 SUPERFAMILY ARM repeat 306 623 IPR016024 -
Vian1g00331 881 MobiDBLite consensus disorder prediction 721 768 - -
Vian1g00331 881 MobiDBLite consensus disorder prediction 662 772 - -
Vian1g00331 881 MobiDBLite consensus disorder prediction 802 881 - -
Vian1g00331 881 SUPERFAMILY PH domain-like 15 111 - -
Vian1g00331 881 Pfam Phosphatase 4 regulatory subunit 3 168 356 IPR006887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00331 Vian-Chr1 2950847 2969415 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00331 K17491 - gmx:100786790 1573.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g00331 1 2950847 2969415 Vian1g00331 1 2950847 2969415 ECH