Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00324 ATGGAATCCCAAACTTTTGTGGCACTAGTAGCTGGTGTCACAGGGATGGCTGGGCTGAGTCTAGCCCAAGCCCTCAAGCAGCCCAACTGTCCCGGAGGCCCATGGAAAGTTTACGGCGCCGCTCGCAGGCCCCCGCCCAGTTGGTTCCCTCCTTCCACTGTCGACCACTTCATCACCTTTGACGCTGTCGACTCTTCCGACACACGCGCCAAGCTTTCACCCGTTGCGAGTGAAGTCACGCACCTGTTCTGGATTACCTTTCAGATTCGTGCAGATGAAGAAGTCAACATAAGAATCAACAAAACCATGCTCTTCAACGTTCTCAGCGCCCTCAAATCTTGCGCCTCTTCAAAGCTTGCCCACGTGACGGTCCAAACAGGCACCAAACACTACATGGGCCCAATTTTCGATCCGGTCCATTCCACCCAACTCATCTCCCACGACTCGCCCTTTCGCGAAAACATGGCGCGGCTCCCTTACCCCAACTTCTACTACGCGCTAGAAGATCTTGTTGCATCCTACACGCCGTCGTTGACGTACTCAGTGCACCGCTCCTCTATTATAATAGGCGCGTCGTCCAGGAGTACACACAACGCGCTGCTCACGCTAGCAACCTACGCTGCGATTTGTCGCCACGTGGGATTGGCGTTTCGGTACCCGGGAACGAAGTACACGTGGGAGCATTTCTGTGACATGACCGATGCCGGAGTGTTGGCGCAGCAGCACGTGTGGGCTGCGGTTTCCCCAGAAGCTAAAAACGAGGCATTCAATTGCACAAACGGCGACGTTTTCACGTGGAAGAGCATCTGGAAGTTGCTGTGTGAAGTTTTCGATGTGGAGTTTGTGGCGTTTGACGAAACGCAAAGGTTTGATTTGGTAGAGCTGATGCGTGATAAGGGTAGCGTTTGGAAGGAGATTGTGGAAAAATTCGAGCTTCAGAATACCGTATTGGAGGAAATAAGCTGCTATGACGCCCTCGAACCGGTGCTAAGTTTTAAGTTTCAACATGTATCTAGCATGAACAAGAGTAGAGAATATGGATTTTTTGGTCATGTTGATACCTTTAAGAGTATCAGATTTTGGGTGGAGAAACTCAGAGAGATGAAGATAATACCATCATATGAATAG 1128 0.508 MESQTFVALVAGVTGMAGLSLAQALKQPNCPGGPWKVYGAARRPPPSWFPPSTVDHFITFDAVDSSDTRAKLSPVASEVTHLFWITFQIRADEEVNIRINKTMLFNVLSALKSCASSKLAHVTVQTGTKHYMGPIFDPVHSTQLISHDSPFRENMARLPYPNFYYALEDLVASYTPSLTYSVHRSSIIIGASSRSTHNALLTLATYAAICRHVGLAFRYPGTKYTWEHFCDMTDAGVLAQQHVWAAVSPEAKNEAFNCTNGDVFTWKSIWKLLCEVFDVEFVAFDETQRFDLVELMRDKGSVWKEIVEKFELQNTVLEEISCYDALEPVLSFKFQHVSSMNKSREYGFFGHVDTFKSIRFWVEKLREMKIIPSYE 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00324 375 CDD 5beta-POR_like_SDR_a 7 310 - -
Vian1g00324 375 Gene3D - 6 372 - -
Vian1g00324 375 PANTHER 3-OXO-DELTA(4,5)-STEROID 5-BETA-REDUCTASE 2 372 - -
Vian1g00324 375 Pfam NAD dependent epimerase/dehydratase family 8 245 IPR001509 -
Vian1g00324 375 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 282 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00324 Vian-Chr1 2881472 2882599 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00324 - - vum:124839932 702.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g00324 1 2881472 2882599 Vian1g00324 1 2881472 2882599 ECH