Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g01061 ATGGCGTCAACTTCCCATGGCAGCGGTGGCGTCTCTGCACGAATGAGGAACGCCGCTTCCACCTTCTGCTCCGACTCTCAGCCGCTTATCGCCGATATCCGAAAAACCGTGCTTCTGATGAAGGACATCGCAGTTCAATTGGAGAAAGACAACCTCCTTGATAAGGTGAAGGAGCTTGAAGATGCGGTTATTGAGTTAGTCGGGTTATCTGAACTAAGTGTGCAATTTTCATCCGCGGTTCAAGTTTTTGCCAACAGATACCAACCTGGAGAAGAGTTCACTAATTTTAGTAAGCTGTTTGAGGATGAGCTTTCCGAGTTTAAGGCCAACCAATCTTCAGATCTTCCTAAACATCCTTTAATACGCCAGTTTAAGGAAGCTGTGTGGAATGTTCATCATTCGGGCCAGCCAATGCCAGGTGAAGAGCAAGAAGATATTGTAATGACCAGTACGCAGTCTAATATTTTAAATGTTAATTGTCCATTGACTGGAAAGCCTATCACTGAGCTTGTAGAGCCAGTTCGCAGCATGGAGTGTAGGCACATTTACGAAAACAAAGTAATTATGCAATATTTGAAGTCAAATCAACAACGTGGTCGATGCCCAATATCAGGTTGCCCAAGGATATTGCAGGCAGATAAGCTGGTGCAAGATCCGTTGTTACTGATTGAGATCGATGAAATGCGCAAAATGAATAAAGAAACTGAAGTAGAAGATTATACCATGCTCGAAGAGGATTAG 741 0.4372 MASTSHGSGGVSARMRNAASTFCSDSQPLIADIRKTVLLMKDIAVQLEKDNLLDKVKELEDAVIELVGLSELSVQFSSAVQVFANRYQPGEEFTNFSKLFEDELSEFKANQSSDLPKHPLIRQFKEAVWNVHHSGQPMPGEEQEDIVMTSTQSNILNVNCPLTGKPITELVEPVRSMECRHIYENKVIMQYLKSNQQRGRCPISGCPRILQADKLVQDPLLLIEIDEMRKMNKETEVEDYTMLEED 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g01061 246 ProSiteProfiles Zinc finger SP-RING-type profile. 142 230 IPR004181 GO:0008270
Vian11g01061 246 Pfam Zinc-finger of the MIZ type in Nse subunit 145 206 IPR004181 GO:0008270
Vian11g01061 246 PANTHER UNCHARACTERIZED 11 236 IPR026846 GO:0000724|GO:0019789|GO:0030915
Vian11g01061 246 SUPERFAMILY RING/U-box 160 207 - -
Vian11g01061 246 CDD SPL-RING_NSE2 160 227 IPR004181 GO:0008270
Vian11g01061 246 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 152 241 IPR013083 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g01061 K22756 - gmx:100804379 413.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g01061 11 14919698 14924106 Vian11g01061 11 14919698 14924106 ECH