Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g01025 ATGGCGGTCGAGGTTGCGGGATTTGAGATGGTTCAAGGACCAGTGGAGAATGGTGCTGAAGGAGGAAAACCTGTTTTACATGAGAAGGAGAATGGGAAGCTGGAAAAAGATGTAGGAGCTGTGGAGGCCATCAAATTTGGGTCACATGGAGATGAATCGGCAAAAGGGAATGATGTTTCTGAGGTGAATGTGCCGAGAGATGCTGCCGAAGAGTGGCCTGCACCTAAGCAGATTCATTCTTATTATTTTGTCAGGTGGCGGCCTTATGAGGATCCAACCATAAAGTCTAAAATTGATGTGCTTGACAAAGAGATTACCAAGAAAAATCAAGCTCGCTTTCAGATCACTGAAGCACTGAAGGCAAAGCGGTCAGGACGAGCCGAGTTGATTTCTCAAATCAAGTCTCTAAGAGGTGACAGTAGGCAATTTCAGAGTATTGTGGATGAGAAAATAAAAGAGATCGAACCTTTGCAGCAAGCACTGGGCAAGCTGCGCAATACAAATAATGTGGGCCGGGGTGGTTTGTGTTCATCTGAGGAGGAACTTAATAGTGTTATATATAGTTTGCAGTACCGCATACAGCATGAGAGCATTCCATTGACTGAAGAAAAACAACTCCTCCGAGAAATCAAACAGCTTGAGGGGACAAGGGAGAAGGTTATTGCCAATGCTGCAATGAGAACCAAGTTACAGGAGTCTATGGGGCAGAAAGAAGCCATTCAAGATCAGGTCAAGCTTATAGGTGGGGATTTGGATGGAGTAAAGAAAGAGAGAGAAGCAATTCGGTCCAAAATCAAGCAAATCGATGAGGCCCTGAAAGCCATTGACAAGGATATCCAGTCTCTACAGGAGGAACTGACAGCCATATCTCAGAAAAGGGACAAATCTTTTGAGAGCATGCAGCAGCTTAAAAAACAGCGTGAGGAGGGGAATTCCTATTTCTATCAAAGTCGAGCAGTTTTGAACAAAGCACGGGATCTGGCTGCAAAGAAAGATATCAATGCTCTTGATGAAGTTTCACAGACAGAGGTTGAGAAATTTATGGCACTCTGGAACAGTGACAAAGCATTCAGGAATGATTATGAAAAAAGAATTTTGGCCTCATTGGATATGCGTCAGTTAAGTCGGGATGGACGGATGAGGAACCCGGATGAAAAGCCCTTACTGGAAGAACCAAAACTTGCTGAAGCTGAAGCAATAGCAAAAACTGTTCCAAAACAGCCAAAGGAGGAGCCTAAGCCTTCTCCACAAGAAACTTTGCCTGCTCAGAAAGAATCCAAAAGCAAAGGGAAAGATTTGAAATCCAAACCAGACATTAAGGATTCAGCAGTAACTGATGAATATGAATTTGAAAATCCCAAAAAGGTGACCCCTGCCAAGGAGCCTGAAATTGATCCTGCAAAGCTGAAAGAGATGAAGCGTGAGGAGGAAATTTTGAAAGCAAAGCAGGCCCTGGAAAGAAAGAAGAAGTTAGCTGACAAAGCTGCAGCCAAAGCAGCAATCAGAGCACAAAAGGAAGCTGAGAAGAAGCTTAAGGACCGTGAGAAGAAAGCAAAGAAGAAGGCTTCAGGTGCTGCTGGAGTTGTTGCTAACCCTGAGGATGAACCAAAAGATGAAGTTGCTGAGACTACTGAAGCAGAAAAGGTTGACGATGACATTCAAGCCCCTGCTCCTGTGAAGGAGAAGGTCCAAAAGGAGATTGGTATCAGGTCCAGGAACCGAGCAAGAGGCCCAGATTCTGTTCCAAAAGTCATTCTTAAGCGTAAGAAGTCTAACAATTACTGGGTGTGGGGTGCAGCTGCAGTTGCTGCTTTGTTAGTCCTCCTTTTGGCAGTGCTTGGATACATCTATCTTTTCTGA 1860 0.4441 MAVEVAGFEMVQGPVENGAEGGKPVLHEKENGKLEKDVGAVEAIKFGSHGDESAKGNDVSEVNVPRDAAEEWPAPKQIHSYYFVRWRPYEDPTIKSKIDVLDKEITKKNQARFQITEALKAKRSGRAELISQIKSLRGDSRQFQSIVDEKIKEIEPLQQALGKLRNTNNVGRGGLCSSEEELNSVIYSLQYRIQHESIPLTEEKQLLREIKQLEGTREKVIANAAMRTKLQESMGQKEAIQDQVKLIGGDLDGVKKEREAIRSKIKQIDEALKAIDKDIQSLQEELTAISQKRDKSFESMQQLKKQREEGNSYFYQSRAVLNKARDLAAKKDINALDEVSQTEVEKFMALWNSDKAFRNDYEKRILASLDMRQLSRDGRMRNPDEKPLLEEPKLAEAEAIAKTVPKQPKEEPKPSPQETLPAQKESKSKGKDLKSKPDIKDSAVTDEYEFENPKKVTPAKEPEIDPAKLKEMKREEEILKAKQALERKKKLADKAAAKAAIRAQKEAEKKLKDREKKAKKKASGAAGVVANPEDEPKDEVAETTEAEKVDDDIQAPAPVKEKVQKEIGIRSRNRARGPDSVPKVILKRKKSNNYWVWGAAAVAALLVLLLAVLGYIYLF 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g01025 619 MobiDBLite consensus disorder prediction 503 578 - -
Vian11g01025 619 PANTHER RNA-BINDING PROTEIN YLMH-RELATED 2 602 - -
Vian11g01025 619 MobiDBLite consensus disorder prediction 532 578 - -
Vian11g01025 619 MobiDBLite consensus disorder prediction 11 32 - -
Vian11g01025 619 Coils Coil 474 521 - -
Vian11g01025 619 SUPERFAMILY Tropomyosin 240 309 - -
Vian11g01025 619 MobiDBLite consensus disorder prediction 503 522 - -
Vian11g01025 619 MobiDBLite consensus disorder prediction 424 471 - -
Vian11g01025 619 MobiDBLite consensus disorder prediction 376 413 - -
Vian11g01025 619 Coils Coil 203 223 - -
Vian11g01025 619 Coils Coil 251 292 - -
Vian11g01025 619 MobiDBLite consensus disorder prediction 376 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g01025 Vian-Chr11 13774262 13777694 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g01025 - - gmx:100819875 946.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g01025 11 13774262 13777694 Vian11g01025 11 13774262 13777694 ECH