Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g01007 ATGAGGGGTCCTTTGGGTGCAGTCATAGGGAGGTACCCTTCAAGTGATGGAAGCACTCATTTGGGTGGAATCATTAAGCACAACAGAAAATGCAGAGACATAGCTGTTCTTATTATCTTTATAGCTTTCTGGATTGCCATGATTGTCAACTCCAGCTTTGCTTTCAACCGAGGAAACCCATTAAGGCTTACTTATGGGCTGGACTACAAAGGAAATGTATGTGGGCAGAAGCATGCAGCTCAAGATCTTCGAGAATTGGAGCTCAAATACTGGCTAAATCCTAATCAGGTTTATCAAAGTGGATTGAAGGACAGCCAATTCAAACTTGCCAATGCCCGCAGTATATGCTTGCTGGACTGCCCTATACCTTCTGAAGATTCACTTACTTGGGTGTGTGATTATCCTGAAGGAGATATTCGCGTTTCACTGAATGATTGGATTGATATGAACTATGATTATTTTGAGTTCCTTACGCCAGAAATGAGAAACTCTTCACTTCAACTTCAGGGCCCTTGTTATCCTGTCATATTTCCTAGTGTAAACGTTTACTGGAGTTGCCAATTTATCGCTAGAGCATCAAATGTATCTTTAAAGCATTGGCAGCAGATGGGTGGAGTTAACATCAAAGAAGACATTATTATTGATAAGTCCATTCATGAGTATATCAATTCTCAGTCAGCTGTCTTAAAGAGATACATGGCTGACATAGGAAAGTCATGGCCTGTGCTGATTGTTTGTGGGGGGATTTTACCTCTGTTTCTGTCTGTGATTTGGCTGCTGATGATTCGGCACTTTGTTGGTGCTATGCCTTGGGTTACAGTGGTTTTGTTTAATGTTCTAATGGTATCGGTTACAATGTTTTTCTACCTTAAAGTTGGCTGGATAGGAAATGATGCTATTTCCCCCATTATTGGTGAGCATGATCCTTACATTCATGTATATGTGAGGGAGCTGACTCATCTACGGGTTTTCACAGTCCTTATGAGCTTTATTATGCTTGTTGCCATTCTTACATCAATTGCTATTGTTCGGCGCATCCTCATGGCAACTTCTGTTGCTGCAAAAGTGATAGGAGAAGTTCAAGCACTTATTGTTTTTCCCATCATACCTTGTGGTATCCTTGCAATCTTCTATATTTTCTGGATTTCTGCTGCTCTACATTTGTTCAGCTCTGGTCAGGTTGTTCAGAACAACTGCAATTCTAATTGCTGCACATATGACCTCATCGAGAAAAAGGTGATATGTGATCGGTGTTGTGGATATAGCATTCATTACACGCCGCATATTGGAGCTGCCATCCTTTTTCACCTATTTGGCTGTTATTGGGCTACACAATTTTTCATAGCTTGCTTGTCAACAGTGATTGCTGGATCTGTTGCTTCTTATTATTGGGCCCATGGTGAAGCATCTCCTGAAATTCCCTTTCTTTCAGTATTTTCCTCCATGAAGAGGCTTATGCTTTACAGTCTTGGTTCTGTGGCTCTTGGTTCTCTGACTGTATCATTTTTAGAGTCAATCCGGTTTCTGCTCGAATGTATTCGCCGGAAACTAAAAGTCTCCGGTCACGTGCCTGATAGCTGGATTGGCAAAGCTGCTTACCAATGTTCTCAATGCTTTCAAAGATGTATTGGGTGGACCATCAAATCAGTGAACCGAAATGCTTATGTCATGATTGCTATAACGGGTAAAAGTTTCTTTAAAGCTTCTGCTATTGCAACCGAATTGATCATGAGTAACATCCTACGGATTGGACGAGTGAATGTGATTGGAGATGTTATTTTGTTCCTTGGAAAACTATGTGTCAGCCTCTCAAGTGTTCTTTTTGCTTTCCTCATGTTGGACACACACAAGTACAGATCCGCACATAACAAGATATCATCTCCACTTTTGCCTGTTGTGGTTTGCTGGGCTCTTGGATATGTTGTTGCAACCCTTTTCTTTGCAGTTGTAGAGATGTCAATAGACACTATCATTCTCTCATTTTGTCAAGATTCTGAAGAGCATGGAACAGCACAGTATGCTCCACCTCTTCTCATTGAAACCCTGGGAGACCAAAATGAGACGCAGAGACTTACACAAGGATCCCAATGA 2091 0.4132 MRGPLGAVIGRYPSSDGSTHLGGIIKHNRKCRDIAVLIIFIAFWIAMIVNSSFAFNRGNPLRLTYGLDYKGNVCGQKHAAQDLRELELKYWLNPNQVYQSGLKDSQFKLANARSICLLDCPIPSEDSLTWVCDYPEGDIRVSLNDWIDMNYDYFEFLTPEMRNSSLQLQGPCYPVIFPSVNVYWSCQFIARASNVSLKHWQQMGGVNIKEDIIIDKSIHEYINSQSAVLKRYMADIGKSWPVLIVCGGILPLFLSVIWLLMIRHFVGAMPWVTVVLFNVLMVSVTMFFYLKVGWIGNDAISPIIGEHDPYIHVYVRELTHLRVFTVLMSFIMLVAILTSIAIVRRILMATSVAAKVIGEVQALIVFPIIPCGILAIFYIFWISAALHLFSSGQVVQNNCNSNCCTYDLIEKKVICDRCCGYSIHYTPHIGAAILFHLFGCYWATQFFIACLSTVIAGSVASYYWAHGEASPEIPFLSVFSSMKRLMLYSLGSVALGSLTVSFLESIRFLLECIRRKLKVSGHVPDSWIGKAAYQCSQCFQRCIGWTIKSVNRNAYVMIAITGKSFFKASAIATELIMSNILRIGRVNVIGDVILFLGKLCVSLSSVLFAFLMLDTHKYRSAHNKISSPLLPVVVCWALGYVVATLFFAVVEMSIDTIILSFCQDSEEHGTAQYAPPLLIETLGDQNETQRLTQGSQ 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g01007 696 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 19 690 IPR007603 GO:0022857|GO:0055085
Vian11g01007 696 Pfam Plasma-membrane choline transporter 326 666 IPR007603 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g01007 Vian-Chr11 13243332 13255856 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g01007 K15377 - gmx:100789185 1300.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g01007 11 13243332 13255856 Vian11g01007 11 13243332 13255856 ECH