Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00998 ATGGAGGCAAATTCAGCTTCATATGAACATGAGGATCAAGATGAATATGTTCTACTTGACCTGGATAGTGTTTCTGACTTAATTAACCTTCCAGCAAATGCCAAGTATGTTCTTACTGGCCTTGATACATTAAACCCAGAATTGATCATTGATGACAAATTTAAGCTGATTGGGCAATATGAGGAGTCAATTGGCACATGTCTTGCTTTTACCGAACAAGATGCCCCCGTGGTTCATGAAGAGACAGGATCATCTGAAGTGAACCTTTTCTCTAGAACAAGACTAATTGATTCAAGTCAAACTCCAACAAAGCAAGTGAAACCTTTTTGTCAGCTTCACAAGATTCTCAAGTTTAAACTATCACCCGATTCTGAAATCCATACCATCACACATGAGGAGGTTAAGTGA 408 0.3873 MEANSASYEHEDQDEYVLLDLDSVSDLINLPANAKYVLTGLDTLNPELIIDDKFKLIGQYEESIGTCLAFTEQDAPVVHEETGSSEVNLFSRTRLIDSSQTPTKQVKPFCQLHKILKFKLSPDSEIHTITHEEVK 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00998 135 PANTHER TRANSCRIPTION INITIATION FACTOR IIIC TFIIIC , POLYPEPTIDE 6-RELATED 2 132 IPR042771 GO:0006383
Vian11g00998 135 Pfam TFIIIC subunit triple barrel domain 11 94 IPR019481 -
Vian11g00998 135 Gene3D - 2 119 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00998 K15203 - gmx:100782116 219.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00998 11 13032511 13034446 Vian11g00998 11 13032511 13034446 ECH