Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00992 ATGTATGAATGGCATGGAAAGAAATACTGGGGTGCTGCACATGGACTTGCAGGAATTATGAATGTTTTGATGGACATGGAACTCAAGCCAGATGAGGTGGAAGAAATCAAGGGTACCCTACGTTACATGATTAACAATCGTTTCCCTAGTGGCAATTATCCCTCCAGCGAAGGAAGTGAAAATGACCGTCTTGTGCATTGGTGTCATGGTGCTCCTGGAGTCACTCTTACCCTTGTAAAGGCAGCTGAGGTTTTTGGGGACAAGGAATTTTTGCAAGCAGCTGTAGATTCAGGGGAAGTAGTATGGAAGAGGGGTCTGCTTAAGCGAGTTGGGATGTGTCATGGCATCAGTGGGAACACCTATGTCTTCCTTTCTCTTTACAGATTGACAGGAAATGAGAAGTATTTGTACAGGGCCAAAGCATTTGCTTGTTTCCTACTTGATAGGGCACATAAACTGATCTCAGAAGGAAAGATGCATGGAGGAGATCGCCCCCATTCCTTATTTGAAGGTCTTGGAGGAATGGCATATACTTTTCTAGATATGGTTGATCCACAAATGGCCAAGTTCCCAGGCTATGAACTTTGA 588 0.4439 MYEWHGKKYWGAAHGLAGIMNVLMDMELKPDEVEEIKGTLRYMINNRFPSGNYPSSEGSENDRLVHWCHGAPGVTLTLVKAAEVFGDKEFLQAAVDSGEVVWKRGLLKRVGMCHGISGNTYVFLSLYRLTGNEKYLYRAKAFACFLLDRAHKLISEGKMHGGDRPHSLFEGLGGMAYTFLDMVDPQMAKFPGYEL 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00992 195 PRINTS LanC-like protein superfamily signature 110 123 IPR007822 GO:0031179
Vian11g00992 195 PRINTS LanC-like protein superfamily signature 9 25 IPR007822 GO:0031179
Vian11g00992 195 PRINTS LanC-like protein superfamily signature 64 84 IPR007822 GO:0031179
Vian11g00992 195 PRINTS LanC-like protein superfamily signature 165 182 IPR007822 GO:0031179
Vian11g00992 195 PANTHER LANC-LIKE PROTEIN 1 195 - -
Vian11g00992 195 SUPERFAMILY LanC-like 1 195 - -
Vian11g00992 195 Gene3D - 1 195 IPR012341 GO:0005975
Vian11g00992 195 PRINTS Eukaryotic LanC-like protein family signature 44 59 IPR020464 -
Vian11g00992 195 PRINTS Eukaryotic LanC-like protein family signature 126 144 IPR020464 -
Vian11g00992 195 PRINTS Eukaryotic LanC-like protein family signature 81 102 IPR020464 -
Vian11g00992 195 SMART LANC_like_2 1 195 IPR007822 GO:0031179
Vian11g00992 195 CDD euk_LANCL 1 191 - -
Vian11g00992 195 Pfam Lanthionine synthetase C-like protein 1 195 IPR007822 GO:0031179
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00992 Vian-Chr11 12859056 12860437 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00992 - - gmx:100786158 385.185
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00992 11 12859056 12860437 Vian11g00992 11 12859056 12860437 ECH