Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00978 ATGGCCTCTGTCCATAGCACCGTCGCTCCCCGCGCCTTACTGCCGTCGATTTCGAAGCCCAAGCCGAGGGCTCCTCACACGAAATTCTTCGCCGCCGCCGCCGGCGCGCAGGACGTTCCGAAATTTTCTCGGGGCCGCATTTTCTCCGGGAACAATCGCGCGGTGGCGGCGAGCGCGGCGGGGGAGGAGTTCGACGTGATATCGGTGCAGAGCACCGATATTACGGACCAGCAGGAAGGCGTGGTGGTGAGTCGCGTCGAAATTGATGGCGCAGACGGTGAATTAGTGACTCAAGTGAACGGATTTGGAGCGAACGATGGTTTGTTGTCGTTGGAAGGGTTTTCTTCTTCCTCTTCGCCGTCTTCTTCGGCGTTGGTTGGGAGTGAGAGCGAGGAGGACGTGGAGAAGCTGATTGATAGAACTATCAACGCTACGATTGTGCTTGCCGCCGGTGCTTTCGCCATCACCAAGCTTCTCACCATTGATAGTGATTACTGGCATGGATGGACGCTATATGAGATACTAAGATATGCACCTCAACACAACTGGTCTGCTTATGAGGAAGCTCTTAAGACAAATCCTGTTCTTGCCAAGATGATGATTAGTGGGATTGTTTACTCTGTTGGGGACTGGATTGCACAGTGCTTTGAAGGAAAACCTCTGTTTGAATTTGACCGAGCCCGGATGTTCAGATCTGGGATTGTTGGTTTTACTCTTCATGGTTCTCTTTCTCATTACTATTACCATTTTTGCGAGGACCTATTTCCTTACAAAGAATGGTGGGTGGTTCCTGCTAAAGTTGTCTTTGATCAAACTGCTTGGTCAGCAATTTGGAACAGCATATATTATACTGTTGTTGCATTACTACGTCTTGATCCTCCTCTCAGTATTTTAAATGAATTGAAGGCTACGTTCTTTCCCATGTTGACGGCAGGTTGGAAGCTGTGGCCATTTGCACATCTCATAACCTATGGTGTGATACCAGTAGAACAAAGACTTCTTTGGGTGGATACCGTAGAGCTAGTTTGGGTGACCATACTTTCAACATTTTCAAATGATAAATCAGAAGCAAAAAGCTCCGAGTCTTTGATGCATACAGAAGTGATATCCACCAAATCTGTTCATCCTCCAGAGGAGTAA 1140 0.4825 MASVHSTVAPRALLPSISKPKPRAPHTKFFAAAAGAQDVPKFSRGRIFSGNNRAVAASAAGEEFDVISVQSTDITDQQEGVVVSRVEIDGADGELVTQVNGFGANDGLLSLEGFSSSSSPSSSALVGSESEEDVEKLIDRTINATIVLAAGAFAITKLLTIDSDYWHGWTLYEILRYAPQHNWSAYEEALKTNPVLAKMMISGIVYSVGDWIAQCFEGKPLFEFDRARMFRSGIVGFTLHGSLSHYYYHFCEDLFPYKEWWVVPAKVVFDQTAWSAIWNSIYYTVVALLRLDPPLSILNELKATFFPMLTAGWKLWPFAHLITYGVIPVEQRLLWVDTVELVWVTILSTFSNDKSEAKSSESLMHTEVISTKSVHPPEE 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00978 379 PANTHER PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17 182 349 IPR007248 GO:0016020
Vian11g00978 379 Pfam Mpv17 / PMP22 family 295 348 IPR007248 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00978 Vian-Chr11 12525048 12528030 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00978 186 354 Miscellaneous Gene Families AT2G14860 26.627 1.68e-15 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00978 K13348 - gmx:100805057 615.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00978 11 12525048 12528030 Vian11g00978 11 12525048 12528030 ECH