Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00923 ATGGCAGCCATGGCTGCTCTTCAGAGCTCAATGACTGGTCTTTCCCTCTCCTCCAACTCTTTCTTAGGCCAGCGCTTTTCCCCCATCACATTCCCCTCTCTTCTTCCGGGTAAGTCAACCGAGAAGCAATGTCCCATTGTAATGAAGCTTAAACGATGGGAGCGAAAGAAGTGTAAACCAAACAGCCTTCCTATCTTGCAAAAAATGCATGTTAAACTTGGAGATACGGTGCAAATCATAACTGGAAGTGAAAGAGGTAAAGTTGGGGAGATCACTAGAATCTTCAAGCATAACAGCACAGTAATAGTGAAAGATTTAAATTTGAAGACAAAGCATGTCAAGAGTAGAGAAGAGGGGGAACCGGGCGAAATTATTAAGATTGAAGGTCCTATCCACAGCTCAAATGTGATGCTGTACTCGAAAGATCAGAAGGTAGCAAGCCGTGTGGGACACAAAGTCCTTGATAATGGTAATAAAGTTCGGTACCTTATAAAGACTGGAGAAATAATTGACAGTTCAGAAAATTGGAAGAAACTGAAGGAGGAGACTACTAAGAAACCTGAAGAAGCTGCTGCTGCTGCTGCATAA 588 0.4286 MAAMAALQSSMTGLSLSSNSFLGQRFSPITFPSLLPGKSTEKQCPIVMKLKRWERKKCKPNSLPILQKMHVKLGDTVQIITGSERGKVGEITRIFKHNSTVIVKDLNLKTKHVKSREEGEPGEIIKIEGPIHSSNVMLYSKDQKVASRVGHKVLDNGNKVRYLIKTGEIIDSSENWKKLKEETTKKPEEAAAAAA 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00923 195 CDD KOW_RPL26 74 138 IPR041988 GO:0003723
Vian11g00923 195 SUPERFAMILY Translation proteins SH3-like domain 67 169 IPR008991 -
Vian11g00923 195 Gene3D - 64 169 IPR014722 -
Vian11g00923 195 SMART kow_9 70 97 IPR005824 -
Vian11g00923 195 Pfam Ribosomal proteins 50S L24/mitochondrial 39S L24 106 170 IPR003256 GO:0003735|GO:0005840|GO:0006412
Vian11g00923 195 Pfam KOW motif 74 104 IPR005824 -
Vian11g00923 195 Hamap 50S ribosomal protein L24 [rplX]. 69 165 IPR003256 GO:0003735|GO:0005840|GO:0006412
Vian11g00923 195 ProSitePatterns Ribosomal protein L24 signature. 74 91 IPR005825 GO:0003735|GO:0005840|GO:0006412
Vian11g00923 195 NCBIfam 50S ribosomal protein L24 68 170 IPR003256 GO:0003735|GO:0005840|GO:0006412
Vian11g00923 195 PANTHER MITOCHONDRIAL RIBOSOMAL PROTEIN L24 2 191 IPR003256 GO:0003735|GO:0005840|GO:0006412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00923 K02895 - gmx:100306643 317.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00923 11 10705702 10707966 Vian11g00923 11 10705702 10707966 ECH