Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00918 ATGACTAGTTCTAACAAGAGGCTTGAGGTTCAAACAGAAGATCAAACTCCACATAAATGGTGTGTTTCACTGGGAGAAGAGCCTTTCAAAAGATTCTTCAGCCAGACTAATCCAACAGTGCACAAGGTTTTTGGTGATGGATCACTTTTCAGTCCACTGTTGTTTGGCAAGTTCTTTGATCCTTCTGATGCCTTCCCTCTATGGGAGTTTGAGTCAGATGTATTGTTATCTCATTTAAGGAGCTCCGGCCAAAGCACTGTGGATTGGTGTCAGACAGCTGAAGGCTACATATTAAAAGCAGAAATACCGGGAACTGGAAAAAATAACATTCAAGTCGTTGTTGATAAGGGGAAGGTTGTGGAAATTAGTGGACCGTGGAAGCAGCAAAGAGACTCAAAGGCCCATGACTGGAGGTGTGGCCATTGGTGGGAACATGGATATGTGAGAAGGCTTGAGATGCCAGAGGATGCAGATTGGAAGAATATAGAAGCATACATACATAATGACATATACTTAGAAATACGTATTCCAAAGAGCAAACAGGGTCGTGATCTTCCTCAGGGAAAGGATGTGGCTTGA 579 0.4301 MTSSNKRLEVQTEDQTPHKWCVSLGEEPFKRFFSQTNPTVHKVFGDGSLFSPLLFGKFFDPSDAFPLWEFESDVLLSHLRSSGQSTVDWCQTAEGYILKAEIPGTGKNNIQVVVDKGKVVEISGPWKQQRDSKAHDWRCGHWWEHGYVRRLEMPEDADWKNIEAYIHNDIYLEIRIPKSKQGRDLPQGKDVA 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00918 192 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 78 192 IPR002068 -
Vian11g00918 192 Gene3D - 26 187 IPR008978 -
Vian11g00918 192 SUPERFAMILY HSP20-like chaperones 52 181 IPR008978 -
Vian11g00918 192 PANTHER 21.7 KDA CLASS VI HEAT SHOCK PROTEIN 3 185 - -
Vian11g00918 192 Pfam Hsp20/alpha crystallin family 89 191 IPR002068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00918 Vian-Chr11 10629196 10630381 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00918 - - gmx:100306244 389.037
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00918 11 10629196 10630381 Vian11g00918 11 10629196 10630381 ECH