Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00916 ATGAAGAATCTCTCTGTTTCACACTTCACTCATTTGAGCTCCTTAAGGATCATGCCTCCTTTCACAAACTTGCATGGAATCTCCAAAACCTTAATTCCCCTGAAATGCCTTCCAAATGCACACGATACCATAAAAAGAGGACAAGTGGTTGGATTTCTTGGAAGCAAAACACAAGAGGAACCATCAGAATGTTCAGTTCAGACCACAAGAAGAACAGCAGCAATAGGGCTTACCACTCTAGTCCTCACATGGCCATTCCATGACAAGATTTCATCAGCCAAAGATAATGGTTTCTGGGTTGAAGATCACCCTCTTCCTCGATTAACTGTCACAAACAATATTGCAAATGAGAAAACGGGGACACGTTCTTTTCTTAAAAGGGGACTGTTCATGCCAGATATTGGACTGAAAGGAAGTGTGCAAAGGATTAAGAGATATTCCTTTGATCTTCTAGCGATGGCAGATTTGGTACATGCAGACACACTCAACTATGTGAGGAAGTACCTAAGACTCAAGTCTACCATCATATACTATGATTTTGACAAGCTTATCTCTGCCACTCCAGTGGATGATGAAAAGCAGCAACTTACTGATATGGCTAACAAGTTGTTTGATAATTTTGAAAGGCTTGAAGAAGCTTCAAGAAAGAAAAGTCTACCTGAAACAAAATCATGCTATCAGGAAACTGAAGTTTTGCTTAAAGATGTCATGGACCGGATGGATGTATTGTACGAAACAATTTAA 744 0.3978 MKNLSVSHFTHLSSLRIMPPFTNLHGISKTLIPLKCLPNAHDTIKRGQVVGFLGSKTQEEPSECSVQTTRRTAAIGLTTLVLTWPFHDKISSAKDNGFWVEDHPLPRLTVTNNIANEKTGTRSFLKRGLFMPDIGLKGSVQRIKRYSFDLLAMADLVHADTLNYVRKYLRLKSTIIYYDFDKLISATPVDDEKQQLTDMANKLFDNFERLEEASRKKSLPETKSCYQETEVLLKDVMDRMDVLYETI 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00916 247 Gene3D - 100 241 IPR023222 -
Vian11g00916 247 FunFam Photosynthetic NDH subunit of lumenal location 3, chloroplastic 102 241 - -
Vian11g00916 247 SUPERFAMILY Oxygen-evolving enhancer protein 3, 130 240 IPR023222 -
Vian11g00916 247 Coils Coil 193 213 - -
Vian11g00916 247 Pfam Oxygen evolving enhancer protein 3 (PsbQ) 51 240 IPR008797 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Vian11g00916 247 PANTHER OXYGEN-EVOLVING ENHANCER PROTEIN 3-1, CHLOROPLASTIC 60 240 IPR008797 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00916 K08901 - gmx:100814163 375.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00916 11 10615764 10616706 Vian11g00916 11 10615764 10616706 ECH