Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00910 ATGGAGTCAATACTGGGTCGGGCTCTCGAGTACACTCTCAAGTACTGGCTCAAATCCTTCTCCCGAGACCAGTTCAAGTTGCAGGGACGCACCGTTCACCTCTCCAATTTAGATATCGACGGCGACGCCTTGCATTCCAGTGTCGGATTGCCGCCGGCGCTCAACGTTGCCACTGCCAAAGTCGGCAAACTAGAGATAACACTTCCGTCTGTGAGCAATGTGCAGACGGAGCCAATCGTCGTGCATATTGATAGACTCGATCTGGTTCTCGAGGAGAATTCTGATTTTGATGCATCGCTTAGTTCGAACTGTTCCGCGCCGTCGGCTGCCTCTGCCAAGGGAAGTGGTTATGGTTTCGCTGATAAGATTGCAGATGGCATGACTATACAAATTCAAACAGTGAATCTATTGCTTGAAACTTGTGGTGGTTCTCGTCGCCAAGGGGGAGCAACATGGGCACCACCTATGGCATCTATCACCATACGCAACCTTTTGTTGTATACTACAAATGAAAACTGGCAGGTTGTAAATCTTAAGGAAGCGCGGGAATTCTCCAATAACAAGAAGTGCATATATGTCTTCAAAAAACTGGAATGGCAATCTTTGTCTATTGATCTTTTGCCTCATCCCGACATGTTCACAGAAGCTACACTAGACCTCTCTGAGGAGGGGTCAAACCTTAGGGATGATGATGGCGCAAAGCGTGTATTCTTTGGAGGAGAGCGTTTTATAGAAGGAATATCAGGAGAAGCATATATCACAATTCAGAGAACTGAGTTAAATAGTCCGCTCGGGCTTGAAGTTCAATTGCACATCAACGAAGCTGTTTGCCCTGCACTAAGTGAACCAGGACTACGTGCACTTCTCCGCTTTATGACGGGGGTTTATGTTTGTCTAAACAGGGGTGATGTTGATTCCAAGCGATCCACTGAAGCAGCTGGGCACACCTTATATATAGTTTATGGGTGTGTACATTTTATTTTTTTAATAGCAACTAAAGCTCCTGCACAATGGTTAATTACAGTTGGTGGCTTATTTTTAAGGGACACCTTTTGTAGCCCTCCATGTATCTTAGTGCAACCATCAATGCAAGCTGGCACTAGAGATGCTTTCCGTGTGCCAGAATTTGCCAGAAGCTTTTGCCCTCAAATATATCCTTTACAAGAACAGCAGTGGCAATTGAATGAGGGAACCCCTCTAATATGCCTCCATGCTCTTAAGATCATGCCCTCTCCACTTCCACCATCCTTTGCTTCTGAAACTGTTATTGACTGCCAGCCACTCGTGATTCATCTCCAGGAAGAATCATGTCTGAGGATATCCTCTTTATTAGCTGACGGTATTGTTGTCAACCCTGGTGATATTTTACCAGATTTCTCGGTGAAATCTTTTATTTTCAATCTCAAGGGACTGGATATTACAGTTCCTTTTGACAAGACCAAATTGGATATTTCCAAAAATGACATGGACAATACAGTCCAGACCTCCTTTTCTGGAGCAAGACTTCATATTGAAAGGCTTTTCTTTCTAAATTCACCCTCACTGAAACTGAGAATGCTGAACCTGGAGAAGGATCCTGCTTGCTTTAGTCTTTGGGAAGGTCAACCAATTGATGCTAGCCAGGAGAAATGGACTGCTAGAGCATCCCAGCTTACTTTGTCTCTGGAAGCATGCATTGATGGACCTGGATGTCAAAGTTCTCTTGGACAGACGGCAGGATTGTGGAGATGTGTTGATCTGAAAGATGCTTGCATAGAAGTGGCTATGGCAACTGCTGATGGCAGTCCCTTGTTACAAGTTCCCCCGCCTGGGGGTATTGTCAGGGTTGGAGTTGCTTGTGAACAGTATCTGTCCAACACTTCTGTTGAACAATTGTTTTTTGTCCTGGATCTCTATGGTTATTTTGGGAGAGTTAGTGAAAAGATAGCAATGGCTGGAAAAAGGAAACAATTGGAGGGCATTAGGGACAAATCCTTTGGTGGAAAGCTGATGGACAAGGTTCCTAGTGATGCTGCTGTCAGTTTATCAGTGAAAAATCTCCAACTTCGATTTCTGGAGTCATCTTCTGTTAATATTGAGGGGCTGCCTTTAGTGCAGTTTCTTGGAGATGATCTATCTACCAGTGCCACTCATAGAACCCTTGGAGGTGCTATTATTGTTTCATCTATTTTACGTTGGGAGAGTGTTGAGATAAGTTGTGTAGATGCTGAGGGGCTCTTGCCATGTGAAAAGGCCTCATTCTTGTGTTCTAAGGAAAATGCTATCTCTCTGAGTGATAATGGATATCCTCAGCTAAGAACTGTTTTTTGGGTGCATAAGAATGAGAAGCATCTATTGAATGGAAATGCTCATTCAGTCCCTTTTCTAGATATAAGCATGGTGCATGTAATACCATTGTATGAACAAGACGTGGAATCTCATAGTTTAAATGTCTCAGCTTCGGTATCTGGTGTTCGTCTTGGTGGTGGAATGAACTATGCTGAAGCCCTCCTGCATAGGTTTGGAATACTCGGGCCTGATGGAGCTCCCGGAATGGGTCTTTGTAAAGGATTGGAAAACTTGCAGAAAGGACCGTTGTCAAAACTTTTTAAGGCAACTCCCCTCCTTGTTGATGATTCAGAAGATGTTGGAAGTATGCTAGAAGGGAAAGAAGCCGCTTTTCCCCAATTGAAGAAGCCTGATGATGTGGATGTAACTATAGAATTGAGAGACTGGTTATTTGCCCTTGAAGATACACAAGAGACAGCTGAAAGATGGTGGTTCTCCAGCCATGAAGATGAAGAAAGAGAAGAGAGGAGTTGGCATGCATCTTTCCATGGTTTACGAGTAAATGCAAAAAGTAGCCCACCAAATGTTCCAGATGGAAAAATACAAGTGCAAAGAATAAAACAACATCCAGTAGAATTGATTACGGTTGGAGTTCAAGGTCTGCAAATCTTGAAGCCTCATTTACAAAAGGGCATTCCTGCATCAATGCTAATTGCAAATGGGGGTAAAGAATCCACCAACGCAGTTGGAGGAATTGGTGTTGAAGTTCGCTTGATTTTAGGTGGGGAGAATGTTGATGATGAAATGGTTAATTGGGAAGTGGAAAACCTAAAATTCTCTGTCAAACAACCGATTGAGGCAGTTGTAACCAAGGATGAGGTTCAGCACCTAACTTTTCTGTGCAAATCTGAAATTGACTCAATTGGCCGGATAACTGCTGGAATTATACGGTTGCTGAAGTTAGAAGGTTCTATTGGCCAGTCAGTAATTGATCAACTTGGGCACCTAGGAAGTGAAGGCATTGATAAGATTTTCTCTCCGGAAAAGGTTAGTAGAGACGGAAGTGTTGGCAGTAGAGGAATTTCTCCATTGCCAATTCTCATAAATGAGGAATCACACAGAACTTCGGAACAAACATTAACTTTGCTTGAGGAAGCACTTCTGGAATCACAGGCTAAACTTAATGATTTAATCAGTGATACTGGTACTTCAGAGTCTTCCTCTCAACACCTTACCGTACTCCAACTGAGTCAAAAGATAGAGACTATGCATGACTTACTGATGCAATTACGGCATCAACTTTAA 3573 0.4324 MESILGRALEYTLKYWLKSFSRDQFKLQGRTVHLSNLDIDGDALHSSVGLPPALNVATAKVGKLEITLPSVSNVQTEPIVVHIDRLDLVLEENSDFDASLSSNCSAPSAASAKGSGYGFADKIADGMTIQIQTVNLLLETCGGSRRQGGATWAPPMASITIRNLLLYTTNENWQVVNLKEAREFSNNKKCIYVFKKLEWQSLSIDLLPHPDMFTEATLDLSEEGSNLRDDDGAKRVFFGGERFIEGISGEAYITIQRTELNSPLGLEVQLHINEAVCPALSEPGLRALLRFMTGVYVCLNRGDVDSKRSTEAAGHTLYIVYGCVHFIFLIATKAPAQWLITVGGLFLRDTFCSPPCILVQPSMQAGTRDAFRVPEFARSFCPQIYPLQEQQWQLNEGTPLICLHALKIMPSPLPPSFASETVIDCQPLVIHLQEESCLRISSLLADGIVVNPGDILPDFSVKSFIFNLKGLDITVPFDKTKLDISKNDMDNTVQTSFSGARLHIERLFFLNSPSLKLRMLNLEKDPACFSLWEGQPIDASQEKWTARASQLTLSLEACIDGPGCQSSLGQTAGLWRCVDLKDACIEVAMATADGSPLLQVPPPGGIVRVGVACEQYLSNTSVEQLFFVLDLYGYFGRVSEKIAMAGKRKQLEGIRDKSFGGKLMDKVPSDAAVSLSVKNLQLRFLESSSVNIEGLPLVQFLGDDLSTSATHRTLGGAIIVSSILRWESVEISCVDAEGLLPCEKASFLCSKENAISLSDNGYPQLRTVFWVHKNEKHLLNGNAHSVPFLDISMVHVIPLYEQDVESHSLNVSASVSGVRLGGGMNYAEALLHRFGILGPDGAPGMGLCKGLENLQKGPLSKLFKATPLLVDDSEDVGSMLEGKEAAFPQLKKPDDVDVTIELRDWLFALEDTQETAERWWFSSHEDEEREERSWHASFHGLRVNAKSSPPNVPDGKIQVQRIKQHPVELITVGVQGLQILKPHLQKGIPASMLIANGGKESTNAVGGIGVEVRLILGGENVDDEMVNWEVENLKFSVKQPIEAVVTKDEVQHLTFLCKSEIDSIGRITAGIIRLLKLEGSIGQSVIDQLGHLGSEGIDKIFSPEKVSRDGSVGSRGISPLPILINEESHRTSEQTLTLLEEALLESQAKLNDLISDTGTSESSSQHLTVLQLSQKIETMHDLLMQLRHQL 1190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00910 1190 Pfam N-terminal region of Chorein or VPS13 1 98 IPR026854 -
Vian11g00910 1190 PANTHER UNCHARACTERIZED 341 1188 IPR026728 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00910 Vian-Chr11 10532419 10540535 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00910 - - gmx:100811661 2062.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00910 11 10532419 10540535 Vian11g00910 11 10532419 10540535 ECH