Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00909 ATGACGGGGGAAGAGGCTAAAAAGGGAAAAACATTTGGCTTAGGGTGTGAGCCTGTGGTGGGATCGTTGGCTCCGGCCAAAAAGAAAGAATACAGAATCACCAATCGCCTCGAAGAGGGGAAACGCCCTATATACGCTGTCGTTTTCAACTTCCTTGACTCTCGTTACTTCAATGTTTTCGTCACTGTTGGTGGCAACAGAATTACTGTTTATCAATGCCTTGAAGGAGGGGTTATAGCTGTTTTGCAGTCTTATGTGGACGAGGATAAGGATGAGGCTTTTTACACTGTGGGTTGGACATGCAGTGATGATGGGAGTCCATATATTGTGGCTGGTGGAAGCAAGGGGATAATCCGAATCATTGATGCTGGCCGTGAGAGCATATACAGGAGTTTTATTGGCCATGGGAATTCTATAAATGAAGTCAGAACCCAAACATTAAAACCATCACTTGTGATATCTGCAAGCAAAGATGAATCTCTTCGGTTGTGGAATACTCAAACTGGAATATGTATCCTGATATTTTCAGGAGCTGGAGGACACCGCAATGAAATCCTAAGTGTTGTATACACTGCTTCGGTTCATGTAAATTATGTTGACTGTACTAGGTGGTTGGGTGATTTTATCCTTTCAAAGAGTGTTGATGATGAAATTATGTTGTGGGAACCTAAAGTGAAGGAAGAAATTACAGGAACGGGTGCAGTTGACGTCCTTCAGAAATACCCCATTCCTGAATGTGATATCTGGTTCATCAAGTTTTCATGTGATTTCCATTTCAACATAGCTACAGTAGGTAACAGGGAAGGCAAGATTTATGTTTGGGAATTGCAGTCATGTCCTCCTGTACTTGCTACAAAGTTGTCACATCCTCAATCAATCTCTCCGATCAGACAGACTGCTACTTCCTTTGATGGAAGTACTATATTGAGTTGCTGTGAGGATGGGACAATATGGCGCTGGGATGATGTTTCAAACTCTTCAACCTAA 987 0.4245 MTGEEAKKGKTFGLGCEPVVGSLAPAKKKEYRITNRLEEGKRPIYAVVFNFLDSRYFNVFVTVGGNRITVYQCLEGGVIAVLQSYVDEDKDEAFYTVGWTCSDDGSPYIVAGGSKGIIRIIDAGRESIYRSFIGHGNSINEVRTQTLKPSLVISASKDESLRLWNTQTGICILIFSGAGGHRNEILSVVYTASVHVNYVDCTRWLGDFILSKSVDDEIMLWEPKVKEEITGTGAVDVLQKYPIPECDIWFIKFSCDFHFNIATVGNREGKIYVWELQSCPPVLATKLSHPQSISPIRQTATSFDGSTILSCCEDGTIWRWDDVSNSST 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00909 328 Gene3D - 26 191 IPR015943 GO:0005515
Vian11g00909 328 Gene3D - 192 324 IPR015943 GO:0005515
Vian11g00909 328 PANTHER POLYCOMB PROTEIN 5 190 - -
Vian11g00909 328 ProSitePatterns Trp-Asp (WD) repeats signature. 152 166 IPR019775 -
Vian11g00909 328 SMART WD40_4 75 122 IPR001680 GO:0005515
Vian11g00909 328 SMART WD40_4 185 222 IPR001680 GO:0005515
Vian11g00909 328 SMART WD40_4 125 165 IPR001680 GO:0005515
Vian11g00909 328 SMART WD40_4 280 321 IPR001680 GO:0005515
Vian11g00909 328 SMART WD40_4 234 275 IPR001680 GO:0005515
Vian11g00909 328 Pfam WD domain, G-beta repeat 130 165 IPR001680 GO:0005515
Vian11g00909 328 ProSiteProfiles Trp-Asp (WD) repeats profile. 132 174 IPR001680 GO:0005515
Vian11g00909 328 SUPERFAMILY WD40 repeat-like 34 321 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00909 Vian-Chr11 10527068 10530955 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00909 K11462 - ming:122065491 473.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00909 11 10527068 10530955 Vian11g00909 11 10527068 10530955 ECH