Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00895 ATGATTTCCTCCAGCAAACTCAAATCAGTGGATTTTTACAGAAAAATCCCTAGAGATTTAACCGAGGCTTCAGTATCAGGAGCAGGGTTATCCATAATAGCAGCTCTCTGCATGGTGTTTTTGTTTGGAATGGAACTTAATAGTTATTTGTCTGTCAGCACCGCTACATCTGTTATTGTTGACAAGAGTAGTGATGGGGACTATTTACGTATAGATTTCAATATGAGTTTTCCTGCCCTTTCTTGTGAGTTTGCAGCGGTTGATGTGAGTGATGTGCTGGGCACAAACAGGCTGAATCTAACAAAAACAATTCGCAAGTTTTCTATTGATTCAAATTTAAGAACCACTGGTCACGAGTACCATTCAGAACCAGCTACTACCAACATAAAGCACGATAATGAAGTACATGAAGAATCCATTGGAGGTTCTCTTGAACTCACAACAGATAATTTTGATAAATATGCTCACCAGTTTCCAGTTACAGTTGTTAATTTTTATGCTCCTTGGTGTTATTGGAGTCAAAGATTGAAACCTTCATGGGAAAAAGCATCTAAAATAATTAGAGAGAGATATGATCCAGAAACGGATGGTCGTATTGTTATGGGGAGGGTAGATTGCACTCAAAATGGAGAATTGTGCCGGAGTTTGGTATTCATTCCAATATCCAGCCATCATGTACAAGGGTATCCTTCAATTCGTATCTTTCGAAAAGGAAGTGATGTGAGGAGTGACCATGGACATCATGAGCACGAGTCCTATTACGGTGATCGCGACACAGATAGCCTAGTCAAGACCATGGACAATTTAGTGGCGTCTCTTCCTTCAGAATCTCAGAAGTTAAGTTTGGGGGATAAATCCACTTTTGCGTCACATACAAAAAGACCAGCACCATCAGCTGGGGGATGTAGAATTGAAGGATATGTGCGTGTTAAGAAGGTTCCTGGAAACTTAATCATCTCAGCTAGATCCGATGCCCATTCCTTTGATGCTTCCCAAATGAACATGTCACATGTCATAAACCACTTATCTTTTGGAAGGAAAGTGTCACCTAGGGTTATGAGTGATGTGAAGCGCTTGATACCTTACGTAGGTAGCAGTCATGACAGGCTGAATGGCCTGTCATTTATCAACACACGGGATTTAGGAGCAAATGTTACTATGGAGCATTACCTTCAGGTAGTTAAAACAGAGGTGATAACAAGAAAAGATTATAAATTAGTTGAGGAGTATGAGTATACAGCGCACAGCAGTGTTGCACAGAGTTTACACATTCCTGTTGCCAAGTTCCATCTTGAGCTCTCCCCCATGCAGGTCTTAATAACAGAAAATCCGAAGTCCTTTTCTCACTTCCTTACGAATGTCTGTGCTATTATTGGGGGTGTTTTCACGGTTGCTGGAATTTTGGACTCCATTTTGCACAACACTATTAGACTAATGAAAAAAGTTGAGCTTGGCAAAAATTTTTGA 1467 0.4035 MISSSKLKSVDFYRKIPRDLTEASVSGAGLSIIAALCMVFLFGMELNSYLSVSTATSVIVDKSSDGDYLRIDFNMSFPALSCEFAAVDVSDVLGTNRLNLTKTIRKFSIDSNLRTTGHEYHSEPATTNIKHDNEVHEESIGGSLELTTDNFDKYAHQFPVTVVNFYAPWCYWSQRLKPSWEKASKIIRERYDPETDGRIVMGRVDCTQNGELCRSLVFIPISSHHVQGYPSIRIFRKGSDVRSDHGHHEHESYYGDRDTDSLVKTMDNLVASLPSESQKLSLGDKSTFASHTKRPAPSAGGCRIEGYVRVKKVPGNLIISARSDAHSFDASQMNMSHVINHLSFGRKVSPRVMSDVKRLIPYVGSSHDRLNGLSFINTRDLGANVTMEHYLQVVKTEVITRKDYKLVEEYEYTAHSSVAQSLHIPVAKFHLELSPMQVLITENPKSFSHFLTNVCAIIGGVFTVAGILDSILHNTIRLMKKVELGKNF 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00895 488 Pfam Endoplasmic reticulum vesicle transporter 297 469 IPR012936 -
Vian11g00895 488 PANTHER ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN 5 487 IPR045888 -
Vian11g00895 488 ProSiteProfiles Thioredoxin domain profile. 124 271 IPR013766 -
Vian11g00895 488 Gene3D Glutaredoxin 126 293 - -
Vian11g00895 488 CDD PDI_a_family 144 266 - -
Vian11g00895 488 Pfam Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) 7 97 IPR039542 -
Vian11g00895 488 SUPERFAMILY Thioredoxin-like 144 269 IPR036249 -
Vian11g00895 488 FunFam Protein disulfide-isomerase 5-4 131 295 - -
Vian11g00895 488 Pfam Thioredoxin 144 251 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00895 Vian-Chr11 10246734 10254432 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00895 - - gmx:100806869 867.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00895 11 10246734 10254432 Vian11g00895 11 10246734 10254432 ECH