Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00736 ATGGCAGGCATGAGCAGTGAGATTTCAACACGGCTGGAGGGAAAATCTGCTGCAATAGTGGTTTGTTGGCTTCTCGGAAATGGATGCCTTTTTTCATGGAATAGTATGCTGACAATAGAAGATTACTACAGTTACTTGTTTCCAAAATATCATTCATCTAGGGTTCTTACACTTGTATATCAGCCATTTGCTGTTGGAACACTTGCGATACTTGCGTATAATGAGGCAAAACTCAATACACGAATTCGGAATATGTTTGGATATATACTTTTTTTCATAAGCACGCTGTTGGTGTTAATTGTGAATTCAGCAACATCTGGTAAAGGGGGGCTTGGAATATTCCTTGCTATATGTGGACTTAGTGGTGCTTTTGGAGTAGCAGATGCTCATGTTCAAGGTGGAATGGTGGGAGACCTGTCCTACATGCAACCAGAGTTCATTCAGTCATTCCTTGCTGGTTTGGCAGCATCTGGTGTATTAACCTCTGCTTTGAGGTTAATTACAAAAGCTGCATTCGATCATTCTAGTGACGGTCTCCGCAAAGGAGCAATTCTTTTCTTTGCCATATCAACATTCTTTGAGCTCCTATGTGTTGTTCTCTATGCATTTATATTTCCTAAACTACCAATTGTGAAGTACTACCGTTCAAAGGCAGCATCAGAAGGATCCAAAACTGTATCAGCTGACCTTGCAGCAGGTGGCATCCGGACATTACCTGGAACAGACGAGGAAAATGCAAAAGATCCTGAGCGGAAGGGAAACAAGCAATTGTTATCGGAAAACATTGATTATGCACTTGATATGTTCCTAATTTATGTGCTAACACTGTCTATTTTCCCTGGATTCCTCTCGGAAGATACTGGATCACATAGTTTGGGTACATGGTATGCTCTCGTCTTAATTGCTATGTATAATGTGTTCGATCTGATAGGAAGATACATTCCACTGATGAAATGCTTGAAATTGGAGTCCCGAAAGTTGATCACAATAGCTACTCTTAGCCGTTTCTTACTTATTCCAGCATTTTATTTCACAGCAAAGTACGGTGACCAAGGTTGGATGATAACGTTAACATCCTTCTTGGGGCTGTCCAATGGTTATCTCACTGTATGTGTCCTAACATCTGCACCAAAAGGTTACAAGGGTCCAGAACAAAATGCCCTGGGAAACATATTGGTGTTGTTTCTTCTTGGAGGTATCTTTGCAGGAGTGACACTTGACTGGCTATGGTTGATAGGTAAAGGATGGTGA 1251 0.4117 MAGMSSEISTRLEGKSAAIVVCWLLGNGCLFSWNSMLTIEDYYSYLFPKYHSSRVLTLVYQPFAVGTLAILAYNEAKLNTRIRNMFGYILFFISTLLVLIVNSATSGKGGLGIFLAICGLSGAFGVADAHVQGGMVGDLSYMQPEFIQSFLAGLAASGVLTSALRLITKAAFDHSSDGLRKGAILFFAISTFFELLCVVLYAFIFPKLPIVKYYRSKAASEGSKTVSADLAAGGIRTLPGTDEENAKDPERKGNKQLLSENIDYALDMFLIYVLTLSIFPGFLSEDTGSHSLGTWYALVLIAMYNVFDLIGRYIPLMKCLKLESRKLITIATLSRFLLIPAFYFTAKYGDQGWMITLTSFLGLSNGYLTVCVLTSAPKGYKGPEQNALGNILVLFLLGGIFAGVTLDWLWLIGKGW 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00736 416 PRINTS Delayed-early response protein/equilibrative nucleoside transporter signature 388 412 IPR002259 GO:0005337|GO:0016020|GO:1901642
Vian11g00736 416 PRINTS Delayed-early response protein/equilibrative nucleoside transporter signature 152 172 IPR002259 GO:0005337|GO:0016020|GO:1901642
Vian11g00736 416 PRINTS Delayed-early response protein/equilibrative nucleoside transporter signature 351 367 IPR002259 GO:0005337|GO:0016020|GO:1901642
Vian11g00736 416 PRINTS Delayed-early response protein/equilibrative nucleoside transporter signature 124 146 IPR002259 GO:0005337|GO:0016020|GO:1901642
Vian11g00736 416 PANTHER EQUILIBRATIVE NUCLEOSIDE TRANSPORTER 9 410 IPR002259 GO:0005337|GO:0016020|GO:1901642
Vian11g00736 416 PIRSF ENT 4 414 IPR002259 GO:0005337|GO:0016020|GO:1901642
Vian11g00736 416 Pfam Nucleoside transporter 126 410 IPR002259 GO:0005337|GO:0016020|GO:1901642
Vian11g00736 416 SUPERFAMILY MFS general substrate transporter 23 409 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00736 Vian-Chr11 7910753 7913192 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00736 5 414 Organic Solute Cotransporters AT4G05120 68.780 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00736 K15014 - gmx:100798899 767.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00736 11 7910753 7913192 Vian11g00736 11 7910753 7913192 ECH
Vian11g00736 11 7910753 7913192 Vian5g00851 5 28909206 28912322 PCT