Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00598 ATGGCGTTTCCTAAGGTTATCACAGCACTTCTTCTTGCACTCACTATGCTCAGAATTAGACCCTCCGCATGCCAAACAGTAGAAGCCAAAGTCTCTTGCACTGACTGCTCTAACAACTACGATTTCTCTGGCATTATGGTCTCAGTGAAGTGTGAAGGTGTGAAAAAGCTGGCTACGGCGACAACAGAAGAGAAGGGTTTCTTTAAGGTTGATCTTCCCAGAGACCATGGAAAAGCTCCCTCAGTGAAGTGTCTTGTGAAACTTCTTGGGGGACCAAATCATCTGTATGCTACAAAGAAGAACCAGGTGTCTGAAATTGTGAAGGGAAAAGAGAAAAACACTTACACAATCTCCACTCCTCTTAGTTTCTTGAGATCATGTCCTAAAAACAGAGAATGCAAGGTTGCTGATAACCAGTTCAGTTCATCCAAAACGTTGGATCTTCCTCTGCCTCCGGAGTGGGGTTTGGCACCCACCAGCTACTATCTTCCTTTTCTCCCCATCATTGGAATACCTTAG 519 0.447 MAFPKVITALLLALTMLRIRPSACQTVEAKVSCTDCSNNYDFSGIMVSVKCEGVKKLATATTEEKGFFKVDLPRDHGKAPSVKCLVKLLGGPNHLYATKKNQVSEIVKGKEKNTYTISTPLSFLRSCPKNRECKVADNQFSSSKTLDLPLPPEWGLAPTSYYLPFLPIIGIP 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00598 172 Pfam Pollen protein Ole e 1 like 27 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00598 Vian-Chr11 6091469 6092279 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00598 - - gmx:100306432 266.929
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00598 11 6091469 6092279 Vian11g00598 11 6091469 6092279 ECH
Vian11g00598 11 6091469 6092279 Vian5g01020 5 31800787 31802119 PCT