Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00564 ATGTCAGAACCACCATTTAGACCACGAGAGAAACTTATTGAGAAGCAAAAGCATTTCCAGAGTGTCCATAAGCACACGTATTTGAAAGGACCATATGACAAGATTACCTCTGTTGCAATACCACTCGCATTGGCAGCATCTTCATTGTATCTGATTGGAAGAGGGATCTACAACATGTCACATGGAATAGGGAAGAAAGAATGA 204 0.4069 MSEPPFRPREKLIEKQKHFQSVHKHTYLKGPYDKITSVAIPLALAASSLYLIGRGIYNMSHGIGKKE 67
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00564 67 Pfam Cytochrome c oxidase subunit VII 10 62 IPR039297 -
Vian11g00564 67 PANTHER CYTOCHROME C OXIDASE SUBUNIT 7 1 67 IPR039296 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00564 Vian-Chr11 5692326 5692669 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00564 - - gmx:100800807 133.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00564 11 5692326 5692669 Vian11g00564 11 5692326 5692669 ECH
Vian11g00564 11 5692326 5692669 Vian5g01062 5 32369373 32369699 PCT