Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00433 ATGTTCGAACACTCTGCAACTGCTTCACCCCTTCCTTCATCTTCTTCTCTCTTCCCTCACCTCACTCATTTCGACACCCTCTCCCAGCTCAACAACTCCGACACCAGTTACTGCTACCACAACAACAGTACCAGTAACTGTAGCAGTGGCTATAGCAGTTATGGTGGCTCTCCCACTTCTGTTCCTACTCCCACCTTTATGCAGAGGAGTGTCAGTAGTAACTCCTTCAACTACACCAACAATGGCACTCACCACCCTCTCTCTGCTTTCTTCGCTGAATTGCTCGACTCCCATGATGCTCCTGTTCGGAGAGTTTGCAGTGCTGGTGATCTCCAGGGGATTAATGGAATTCAACACAATCACCTCTCGGATAGTCCGTTGTCAAGCGAAAGCAGTATGATTATAGAAGGTATGAACAGAGCTTGTAGATATAGCCCAGAGGAGAAGAAGGTGAGAATTGAGAGATACAGAAGCAAGAGGAACCAGAGGAATTTCAACAAGAAAATCAAGTGGAGCCAAAGTGGTGGAGACGAAGAGGATGAAGAAGATGAGAATTGGTTCACCATCTTAGATTCCTTAGTTGCTGCAAATTTTGCTCAAGAGTCTCAAGGCAGTTGTTCCTCCTTTGGTGTATTCTATTAG 642 0.4595 MFEHSATASPLPSSSSLFPHLTHFDTLSQLNNSDTSYCYHNNSTSNCSSGYSSYGGSPTSVPTPTFMQRSVSSNSFNYTNNGTHHPLSAFFAELLDSHDAPVRRVCSAGDLQGINGIQHNHLSDSPLSSESSMIIEGMNRACRYSPEEKKVRIERYRSKRNQRNFNKKIKWSQSGGDEEDEEDENWFTILDSLVAANFAQESQGSCSSFGVFY 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00433 213 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 56 170 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00433 Vian-Chr11 4057112 4059002 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00433 - - gmx:102661609 261.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00433 11 4057112 4059002 Vian11g00433 11 4057112 4059002 ECH
Vian11g00433 11 4057112 4059002 Vian5g01251 5 35245840 35248089 PCT