Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00334 ATGATCATGGATAGAACATCGCAGAGCAGCTCCGATTCCCCGACGCGAGATCCGAAAGTGCTTTCCATCGAATGTCTGAGAGGAAGCTCGAAAGCCGATGAGTGGACCGGCGACATGCTCCAAAGCGGCGACATCGTGGAGGAGCTCCGAATCGGTTCGACGGCGAAATCGCAGATCCGGTACCAGTCGCCGTTCAAGGGCGGGAGGAGCGGCGTGCAGAAGATCCTTCAGGAGGCGTTCAAGAAGAAGGAGACGTCGATTGTGGTTCGGGTGCGACGAGGGTCGGAGGAGTTGGCGGAGTTGCAGGCGTGCATCGTGCCTAACGAATTCGCGGCGAAGAAGGGTTTGGTTCTTCGCTCGATTGATGACCCGAATTACGTGGTCGGGTTCTTGGATCGGACCGAAGCAGAATGCTATGAGCTTCAAGCTTCAAGGGGCACTAGGATGGTCAATGCACTGACCAGGACCAAGTTACAGGATGGATATGTTTCGTATTCGTGGGAGAGGAGGATGCAAGAAATGCTACCGATTCCTAATTCTAGCAACTTTCTTTCTATATTATTCCTTCCCAAAGCTTCAGATCGTGTAGCTTCTCGCTACAATGATTTGGAGGATACCCTGGCCAGGGCAAATGCATGGCTCAATGCTGGTCAAGCTTCAGGGGTCCCTATTGTCTTCATGAACATCCAAACTGAGTCCCTACTTACTAAGATATCAGGAGAGACCGCTTCTTCCACTGTGAATGCGGGGTCTTTATCTGACTTAGCTAACTTGGCAAATGAAAGCCTTTACGGGTTTGAGGATTACCATGGAGTAGACATTGGCGTTGTACGAGCAGTTCGCCTGTGGTATGCTCCGGTTGCTGGAGAGTTCTCTATTGAAATCAAACTGAAAGAGGAAGACTCAAAGCTTGGCTTTGCCATTAGTCGTACTGAAGAGGGATTTATTTTCATCTCATCAGTGATTAATCAAGAAAATGTACCAGCAACACGATCAGGCCTGAGCAATCTGTATAAGCTGGCAACAGATACTTGTAGGATGTTGGTGGTTTCAAGAGTGTCAAATCAAAAAGTCCTTCCATGGATGGTTTCTTCAACAGGAGCTATTCGGTGTTATGACACTGTTTCACTCAGCCAGAAGCTGTCCTTGCACCGACACACCAGAGTTCCCATTCTCCTGCACGTCTTCCTTTGGGACAGGGCTTTGGCTTCAAGTGTAGGAAGCACGAGATTTAGGGCTCTGTCTTCTGTGTTGCCATCACATGCATCTGAAGTTCCGTTAGCACCCATTCCCAACGAAACTCATGTACTGCCATTGCCCCCTCCTCCACCTTCTGAACCAACTCATACTGCATCAGATATTTCCCACTCAAGGCTTCAGAGAGACACGGCTGGAGAATTCTCTTTTAGATTCCACGATTTTGCTTTGTCTAGTAACTGGGTATGA 1446 0.4903 MIMDRTSQSSSDSPTRDPKVLSIECLRGSSKADEWTGDMLQSGDIVEELRIGSTAKSQIRYQSPFKGGRSGVQKILQEAFKKKETSIVVRVRRGSEELAELQACIVPNEFAAKKGLVLRSIDDPNYVVGFLDRTEAECYELQASRGTRMVNALTRTKLQDGYVSYSWERRMQEMLPIPNSSNFLSILFLPKASDRVASRYNDLEDTLARANAWLNAGQASGVPIVFMNIQTESLLTKISGETASSTVNAGSLSDLANLANESLYGFEDYHGVDIGVVRAVRLWYAPVAGEFSIEIKLKEEDSKLGFAISRTEEGFIFISSVINQENVPATRSGLSNLYKLATDTCRMLVVSRVSNQKVLPWMVSSTGAIRCYDTVSLSQKLSLHRHTRVPILLHVFLWDRALASSVGSTRFRALSSVLPSHASEVPLAPIPNETHVLPLPPPPPSEPTHTASDISHSRLQRDTAGEFSFRFHDFALSSNWV 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00334 481 MobiDBLite consensus disorder prediction 431 457 - -
Vian11g00334 481 PANTHER OS02G0717600 PROTEIN 7 469 - -
Vian11g00334 481 MobiDBLite consensus disorder prediction 433 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00334 Vian-Chr11 3160170 3164149 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00334 - - var:108333257 931.784
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00334 11 3160170 3164149 Vian11g00334 11 3160170 3164149 ECH
Vian11g00334 11 3160170 3164149 Vian5g01382 5 36457584 36460043 PCT