Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00203 ATGGCAGTGGCACTTGTAGCCAAGCCAAACCAAACATCTGAATCAAAAAGCCTCTTTTTCGGTACTCTTCATCAGATTCAGATTCATAGCGAAAGCATAAGCAAACAGCAGCCATCTCTGTTATCTCAACTCTCAAGGGATTCATTTTTTGTTTTATTCATGTATAGAGCTGCATCTTCACATCTCACCCTTCTCAAGGGAAATGGGAGAACCGTGGGAGACTCCAGATTTGCTTCGCGAGGTCTGTTCAGCTGGCTTACTGGGGAATCTTCCAGTTCTCTTCCTCCTCTGGACACCCCATTTAGAGGGTTTCCCCCTCCATCTTCACTGCCAGATTATGTTGAACCAGGAAAGACCAAGATCACAACTCTCTCCAATGGTCTTAAAATAGCATCAGAAACCTCACCAAACCCTGCTGCATCAGTAGGGTTATATGTTGACTGTGGTTCCCTCTATGAGTCGCCATTGTCAAGCGGGGCATCGCACCTGCTAGAGAAAATGGCTTTCAAGAGCACGACAAACCGAAGCCACTTTCGTGTTGTAAGGGAAGTGGAAGCAGTGGGTGGTAATGTAGGAGCCTCAGCCTCTCGGGAGCAAATGGGCTACACTTTTGATGCTCTGAGAACCTATGTCCCACAAATGATTGAATTGCTGGTTGACTCTGTAAGGAATCCGGCCTTCTTGGATTGGGAGGTCAACGAAGAGATTCGAAAGGTTAAAGAAGAGATAGGAGAGCAAGCAAACAATCCACAGCGCCTACTTATGGAGGCAGTTCACTCTGCTGGTTATTCTGGAGCATTGGCTATGCCACTTTTGGCTACTGAATCAGCACTGAACAGATTAAATGCCCCCATTTTAGAGGAGTTTGTTGCCGAGAATTATACTGCACCTAGAATGGTACTTGCAGCATCTGGGGTTGAGCATGAAGAACTTCTATCCGTTGCTGAACCACTTCTCTCTGATCTACCATGTGTTCCGCGTTCTGAAGAACCAAGTTCTAAATATGTTGGGGGTGATTTTCGTCGACAAGGTGAATCAGGGGTTGCACATGTGGCTATTGCCTTTGAAGTGCCTGGTGGCTGGAAAAAAGAGAAAGAAGCTATTATTTTGACCGTTCTACAGATGCTTATGGGAGGAGGTGGGTCATTCTCAGCTGGGGGACCTGGAAAGGGAATGCACTCAAGGCTTTATCTTCGTGTCTTGAATGAATACCAACAGATTCAATGTTTTTCTGCATTCAACAGTCTCTTCAACAATACAGGGTTATTTGGCTTATATGCAACCACAAGTTCTGATTTTGTGGAAAAAGCTGTGGACCTAGCAATACAGCTTGACCGTGCCAAGGAATCCACGAAGTCTGCAGTACTAATGAATTTAGAACTAATTGCTATTGCAGATGATTGCATCAGAGGATATAGGAAGGCAGATATTGACTTACGGAGAAAGGAAGTAGATGCAATCACTTTGAATGATATCTCTAAATTTTCTCAGAAGATTATTTCATCGCCTCTCACTATGGCATCCTATGGGGATGTTATGAATGTCCCAAGTTATGAATCCGTTAGCAGCAAGTTCCATGCAAAATGA 1587 0.4449 MAVALVAKPNQTSESKSLFFGTLHQIQIHSESISKQQPSLLSQLSRDSFFVLFMYRAASSHLTLLKGNGRTVGDSRFASRGLFSWLTGESSSSLPPLDTPFRGFPPPSSLPDYVEPGKTKITTLSNGLKIASETSPNPAASVGLYVDCGSLYESPLSSGASHLLEKMAFKSTTNRSHFRVVREVEAVGGNVGASASREQMGYTFDALRTYVPQMIELLVDSVRNPAFLDWEVNEEIRKVKEEIGEQANNPQRLLMEAVHSAGYSGALAMPLLATESALNRLNAPILEEFVAENYTAPRMVLAASGVEHEELLSVAEPLLSDLPCVPRSEEPSSKYVGGDFRRQGESGVAHVAIAFEVPGGWKKEKEAIILTVLQMLMGGGGSFSAGGPGKGMHSRLYLRVLNEYQQIQCFSAFNSLFNNTGLFGLYATTSSDFVEKAVDLAIQLDRAKESTKSAVLMNLELIAIADDCIRGYRKADIDLRRKEVDAITLNDISKFSQKIISSPLTMASYGDVMNVPSYESVSSKFHAK 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00203 528 SUPERFAMILY LuxS/MPP-like metallohydrolase 117 326 IPR011249 GO:0046872
Vian11g00203 528 SUPERFAMILY LuxS/MPP-like metallohydrolase 338 519 IPR011249 GO:0046872
Vian11g00203 528 Gene3D - 111 321 - -
Vian11g00203 528 PANTHER METALLOPROTEASE 109 516 - -
Vian11g00203 528 FunFam Mitochondrial-processing peptidase subunit beta 109 324 - -
Vian11g00203 528 Pfam Peptidase M16 inactive domain 282 443 IPR007863 -
Vian11g00203 528 Pfam Insulinase (Peptidase family M16) 130 274 IPR011765 -
Vian11g00203 528 ProSitePatterns Insulinase family, zinc-binding region signature. 149 172 IPR001431 GO:0004222|GO:0006508
Vian11g00203 528 Gene3D - 328 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00203 Vian-Chr11 1861341 1865410 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00203 K01412 - gmx:100810996 740.725
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00203 11 1861341 1865410 Vian11g00203 11 1861341 1865410 ECH
Vian11g00203 11 1861341 1865410 Vian9g00214 9 1752885 1757768 PCT