Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00123 ATGGACGTTGTTCTTCAAACCAGAGGCCTTCTCTCTCTCCCCACAAACCCCATTAACAAGGTTTCACTTTTACACCCCTCCCAAGGTTTAAGGCTCAGGCTTTTCTCACCCAAGCCAAAAATCCTTGCTGCATCTTCTCCTTCCTTCAATGGGTTCCAAAAACTCTCACCAAAACCCAATGTCTTTGCCCATAGGGACAAAAATCAAAATTTATTCTTGTGCAGGGCTGAGGCTTCCGCAGCTGCAGCCTCCTTTGGGGAATCAGAAACTGAGAAACCCAAGATTTTTGGTGTTGAAGTTGCCACCTTGAAGAAGATTGTGCCTCTGGGGATGATGTTCTTCTGTATCCTCTTCAACTACACCATCTTGAGAGACACAAAGGATGTGTTGGTTGTGACGGCCAAAGGAAGCAGTGCTGAGATTATACCGTTTCTCAAAACTTGGGTCAACCTTCCCATGGCTATTGGCTTCATGTTGTTGTACACTAAGTTGGCTAATGTGTTGTCCAAACAAGCTCTTTTTTACTCTATAATCCTTCCCTTCATTGCCTTCTTTGGGGCATTTGGTTTTGTTCTGTACCCTCTCAGCAATCATATCCACCCGGAGGCGTTTGCGGATAAGCTTCTTAATATCCTTGGTCCTCGGTTTCTTGGTCCTCTTGCAATTATGAGGATATGGAGCTTTTGTTTGTTCTATGTCATGGCTGAATTGTGGGGGAGTGTAGTCATTTCGGTGCTGTTTTGGGGATTTGCCAATCAGATAACAACTGTTGAGGAAGCAAAACGGTTCTATCCTTTATTTGGACTTGGTGCCAATGTAGCCCTTGTGTTCTCTGGTAGAACAGTGAAATACTTTTCTAATCTTAGGAAGAATTTAGGTCCTGGAGTTGATGGTTGGGCCATCTCTCTAAAAGGAATGATGAGCATAGTTGTGGGCATGGGACTCGCAATCTGTTTAATATATTGGTGGGTGAATAACTATGTTCCACTTCCTACACGTAGCAAGAAGAAGAAGGAGAAGCCCAAAATGGGAACAATGGAGAGCATAAAATTTTTGGTGTCTTCAAAATACATAAGGGATCTTGCCACTTTAGTGGTTGCATATGGAATTAGCATTAATCTTGTTGAAGTTACGTGGAAATCAAAGCTCAAAGCTCAGTTTCCTAGCCCCAATGAGTACTCATCTTTCATGGGAGACTTTTCAACTGCAACTGGAATTGCTACATTCACAATGATGCTTTTAAGCCAATTTATCTTTGACAAATATGGATGGGGAGTTGCTGCCAAGATCACCCCCACTGTTCTGCTTTTAACAGGAGTTGGTTTCTTCTCTCTCATATTATTTGGCGGCCCAATTGCTCCTGTTATTGCAAATTTGGGAATGACTCCACTGCTAGCTGCTGTATACGTGGGTGCATTGCAGAACATATTCAGCAAGAGTGCTAAGTACAGTTTATTCGATCCCTGCAAAGAAATGGCCTACATACCCTTGGATGAGGATACCAAGGTGAAGGGGAAGGCAGCCATTGATGTAGTGTGCAACCCATTGGGGAAATCTGGTGGAGCTCTAATTCAGCAGTTCATGATCTTAAGTTTTGGTTCACTTGCTAATTCAACTCCATATCTGGGAGGGGTGCTTCTGGTGATTGTTCTTGCCTGGTTATCAGCAGCCAAGTCTCTTGATTCCCAGTTTTCAGCTTTGCGTAGAGAAGAAGAGCTTGAGAAAGAGATGGAAAGAGCAGCTGCTGTCAAGATACCAGTGGTGGCTAAGGATGAAGATGGAAATGGTTCTCTTGCAGGTGTTCCACTGTTGAATCCAACAGCTGGTGGTGACTCCTCAAGTACATTGAATTGA 1854 0.4358 MDVVLQTRGLLSLPTNPINKVSLLHPSQGLRLRLFSPKPKILAASSPSFNGFQKLSPKPNVFAHRDKNQNLFLCRAEASAAAASFGESETEKPKIFGVEVATLKKIVPLGMMFFCILFNYTILRDTKDVLVVTAKGSSAEIIPFLKTWVNLPMAIGFMLLYTKLANVLSKQALFYSIILPFIAFFGAFGFVLYPLSNHIHPEAFADKLLNILGPRFLGPLAIMRIWSFCLFYVMAELWGSVVISVLFWGFANQITTVEEAKRFYPLFGLGANVALVFSGRTVKYFSNLRKNLGPGVDGWAISLKGMMSIVVGMGLAICLIYWWVNNYVPLPTRSKKKKEKPKMGTMESIKFLVSSKYIRDLATLVVAYGISINLVEVTWKSKLKAQFPSPNEYSSFMGDFSTATGIATFTMMLLSQFIFDKYGWGVAAKITPTVLLLTGVGFFSLILFGGPIAPVIANLGMTPLLAAVYVGALQNIFSKSAKYSLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILSFGSLANSTPYLGGVLLVIVLAWLSAAKSLDSQFSALRREEELEKEMERAAAVKIPVVAKDEDGNGSLAGVPLLNPTAGGDSSSTLN 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00123 617 Pfam TLC ATP/ADP transporter 92 564 IPR004667 GO:0005471|GO:0006862|GO:0016020
Vian11g00123 617 PANTHER - 54 597 IPR004667 GO:0005471|GO:0006862|GO:0016020
Vian11g00123 617 SUPERFAMILY MFS general substrate transporter 106 555 IPR036259 -
Vian11g00123 617 NCBIfam NTP/NDP exchange transporter 98 564 IPR004667 GO:0005471|GO:0006862|GO:0016020
Vian11g00123 617 MobiDBLite consensus disorder prediction 592 617 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00123 Vian-Chr11 1079167 1082332 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00123 1 599 Organic Solute Cotransporters AT1G80300 81.639 0.0 980
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00123 K03301 - gmx:100775892 1103.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00123 11 1079167 1082332 Vian11g00123 11 1079167 1082332 ECH
Vian11g00123 11 1079167 1082332 Vian9g00125 9 955884 959365 PCT