Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01843 ATGCCCCGCGCCACGCTCCCTTCCAACCGCCGACGATTTCCGGCCACGTCTTACCACCACGCAACCGGTAACTTCACCACCATCATGTTGCCGGAATCCGCCCTCGTTTTCCGGCGGAGCATCGGTGCCGCACTCTTCTTCCTCCTCGTCTCTTTCTCGTGTCTACTCCTCTTCAGAAACGCCGATTACTCTCGCTTCACCTCTTCCAATCACTTCGGTCGCGTATCTGCTGTTTTTCCGTCCAACGATTCCGTCGCGATAAGCAATGAGTATTCACTTGAAAATATTCTGAATGAGGCTGCTATGAAAGACAAAACTGTTATCTTGACCACATTAAATGAAGCCTGGGCAGCACCAGATTCAATCATTGATCTATTCCTTGAGAGCTTTAGAATTGGAGATCGTACTCGCCGGCTTTTGAATCATTTAGTAATTGTTGCATTAGACCCGAAAGCTTTTATGCGTTGTCAGGCAATACACTCCTATTGCTATTTGCTTGCTAGTGAAGCCGTTGATTTTCATGAAGAGGCATTTTTCATGACTCCTCGTTACTTGAAGATGATGTGGAGACGGATTGATTTCCTGCGATCCGTTCTAGAGTTGGGGTACAATTTTGTGTTCACGGATGCTGACATCATGTGGTTTAGAGATCCGTTTCCTCGGTTTCATACGGATGCAGATTTCCAGATAGCCTGTGATCATTTCACAGGCAGATTTGATGATGTAGAGAACAGACCCAATGGAGGGTTCAACTTTGTACAGTCCAATAATAGGTCAATTGAGTTTTACAAGTTCTGGCATTCTTCACAAGAAACCTACCCCGGTTACCATGATCAGGATGTTCTCAATTTTATCAAGGTTGACCCTTTCATTACTGATTTAGGACTGAAGATGAAATTCTTGGATACAGCTAATTTCGGTGGGCTTTGTGAGCCAAGTAAAGATTTAAATAAGGTTTGCACGATGCATGCAAATTGTTGCTATGGTATGGATAGTAAACTTCATGATCTTAGAGTCATGCTTCAAGATTGGAAATATTATTTGACCTTAGCTCCAAGTTTGAAGAGGTTGTCAATTATTTCCTGGAGGGTACCTCAGAAATGCAGCCTTGATTCTCTGAAGCATCCCGGTGCACCAGAAAAGAGCGTTCAGGAGAATTGA 1161 0.441 MPRATLPSNRRRFPATSYHHATGNFTTIMLPESALVFRRSIGAALFFLLVSFSCLLLFRNADYSRFTSSNHFGRVSAVFPSNDSVAISNEYSLENILNEAAMKDKTVILTTLNEAWAAPDSIIDLFLESFRIGDRTRRLLNHLVIVALDPKAFMRCQAIHSYCYLLASEAVDFHEEAFFMTPRYLKMMWRRIDFLRSVLELGYNFVFTDADIMWFRDPFPRFHTDADFQIACDHFTGRFDDVENRPNGGFNFVQSNNRSIEFYKFWHSSQETYPGYHDQDVLNFIKVDPFITDLGLKMKFLDTANFGGLCEPSKDLNKVCTMHANCCYGMDSKLHDLRVMLQDWKYYLTLAPSLKRLSIISWRVPQKCSLDSLKHPGAPEKSVQEN 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01843 386 PANTHER EXPRESSED PROTEIN-RELATED 43 368 IPR044821 -
Vian10g01843 386 Pfam Nucleotide-diphospho-sugar transferase 139 337 IPR005069 -
Vian10g01843 386 SUPERFAMILY Nucleotide-diphospho-sugar transferases 153 323 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01843 Vian-Chr10 30222385 30225261 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g01843 - - gmx:100812064 642.114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g01843 10 30222385 30225261 Vian10g01843 10 30222385 30225261 ECH