Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01827 ATGGGGTCACACGTGAGCAAGAAGACCCATGAAACATCATCCGGAATTAACTTCAATACAGATATGGCAACTGAACTGAGGTCATATGAGGATGCATGGAAACTTGATTCTGATTTGCAGTCTTTTGATACCACAGTCCAAGCTCGAGCAAATCAAGTCATGAATACTCTAGCAGTTGGAGTTGAGGTTCGGTCCCTTTCGTTTGAGTCTCTGAAACAAGTCACAGAGTGCCTTCTGGAAATGAATCAGGAAGTTGTCAAGGTGATCTTAGACTGCAAGAAAGATATATGGAAGAATCGAGAACTGTTTGAACTTGTTGAGGAGTACTTTGATAACAGCTTGCAGACTCTAGATTTTTGCACTGCATTGGAGAAGTGCCTGAAACGAGCCAGGGATAGCCAATTGCTTATTCTTGTTGCCCTTCAACAATTTGAAGAGGAAACTGAGATGGGAGAGAAGCACTATATCAGGACATTACAGGAACTGAAGAATTTCAAGGCAGCTGGTGACCCTTTCAGTGAAGAATTCTTCCAAATGTATCAATCTATTTACAACCAGCAGATACTAATGCTTGAGAAATTGCGAGTGAGACAAAGCAAGCTTGATAAGAAAGCTAAACAAATCCACACCGGGAGGAAAGTATCAAGTATGATATTTGTGGCTACAGTTGCTGCTGTGTTGATCTGTTCAATTGTGGCTGCAGCAATTGCTACTCCACATGTTGCAGCTGCTCTAGCTGCTGTTACTGCAGTCCCAATTGGTTCAATGGGAAAGTGGATTGACTCCTTGTTGAAGAACTATGAAACTGTTGTGAGAGGACAGAAGGAAGTAATTGTCTCGATGCAAGTTGGAACCTATGTTGCTATAAAGGACTTGGACAACATTCGGGTCCTCATTGATAGGTTGGAAATTGAGATTGAATCTCTTTTGCAGAATGTGAAATTTGCCATTGAGGATGATGCTGTGAAGGTTGCAATAGAAGAGATCAAGAAGAAATTGGAAGTTTTTATGAAGAATGTTGAAGATTTAGGAGGACAAACTGATAATTGTAGCAGGGACATTATAAGAGCTAGAACTGTGGTTCTACAAAAAATCATAAAGCTTCCCCACACTTAA 1116 0.4077 MGSHVSKKTHETSSGINFNTDMATELRSYEDAWKLDSDLQSFDTTVQARANQVMNTLAVGVEVRSLSFESLKQVTECLLEMNQEVVKVILDCKKDIWKNRELFELVEEYFDNSLQTLDFCTALEKCLKRARDSQLLILVALQQFEEETEMGEKHYIRTLQELKNFKAAGDPFSEEFFQMYQSIYNQQILMLEKLRVRQSKLDKKAKQIHTGRKVSSMIFVATVAAVLICSIVAAAIATPHVAAALAAVTAVPIGSMGKWIDSLLKNYETVVRGQKEVIVSMQVGTYVAIKDLDNIRVLIDRLEIEIESLLQNVKFAIEDDAVKVAIEEIKKKLEVFMKNVEDLGGQTDNCSRDIIRARTVVLQKIIKLPHT 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01827 371 PANTHER UPF0496 PROTEIN 3-RELATED 25 367 IPR007749 -
Vian10g01827 371 Coils Coil 326 346 - -
Vian10g01827 371 Coils Coil 292 319 - -
Vian10g01827 371 Pfam Protein of unknown function (DUF677) 39 365 IPR007749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01827 Vian-Chr10 30072575 30073690 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g01827 - - gmx:100802986 612.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g01827 10 30072575 30073690 Vian10g01827 10 30072575 30073690 ECH