Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01825 ATGTACATTTCATTCAAGTCCAATTCCCAAAACCCTAAACACCAGAAACACCATCATGATCACCATGAAACAACACCCAACAAGAAATTCAACGAGATATCTCACTTCAGCCACAAACAACACAAGCTAATGTTTGACTACTCCGAATCCCCCTTCCAATGTGATGGTTGCAAGGAACTAGGCATAGGCTCACGCTATAGTTGTTCCCTATGCGACTTCGACCTTCACACTCACTGTTCCATTCCTTCTCCTTCACTTTTCCACCCTTTTTACCCTAAATGTTCCTTCCACTTTCTTTCTCATCCTCCTGGTGACACTCCCCGTTATTGCAATGCCTGCGAGAAACCTGTTAAAGGCTTTCTTTACCACTGCTTCTCATGTGGTTTCGACCTCCATCCTTGTTGTGCCAAGCTGCCAACAGTTATAGGCAGTGACGACAATAAGAAAAGTAGTGATAAAAATGAGGTAAGACTGCTCTTGTACCGGACGGTGAGCTCAACATGTCACCGGTGCGGGCAGAAGGGGCGGGGGTGGAGCTATAGGTCGTCATGCAAGAGGTATAACTTGCATGTGGCGTGTGTGAGGGAGATGGTGGTGGAGAGTTGGCATGAAGGTAGGGGGTTGAAGAGTGTCGTTGAGAGTGGTTGCCACAAGGGGAAAGGTGGTAGGGTGAGGAAGTGTTGTGAGGTGGCCGGAGTGGCTATTCAGGTGGTGGTGTCGGCAGTGCTAGGTGATCCCACTGCTCTTATTGCCGGCATTGTAGGATCGTTGGTCTCGCGAGCTTGA 786 0.4873 MYISFKSNSQNPKHQKHHHDHHETTPNKKFNEISHFSHKQHKLMFDYSESPFQCDGCKELGIGSRYSCSLCDFDLHTHCSIPSPSLFHPFYPKCSFHFLSHPPGDTPRYCNACEKPVKGFLYHCFSCGFDLHPCCAKLPTVIGSDDNKKSSDKNEVRLLLYRTVSSTCHRCGQKGRGWSYRSSCKRYNLHVACVREMVVESWHEGRGLKSVVESGCHKGKGGRVRKCCEVAGVAIQVVVSAVLGDPTALIAGIVGSLVSRA 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01825 261 PANTHER CYSTEINE/HISTIDINE-RICH C1 DOMAIN FAMILY PROTEIN 29 257 - -
Vian10g01825 261 Pfam C1 domain 99 136 IPR004146 -
Vian10g01825 261 Pfam C1 domain 36 80 IPR004146 -
Vian10g01825 261 SUPERFAMILY Cysteine-rich domain 30 90 IPR046349 -
Vian10g01825 261 MobiDBLite consensus disorder prediction 1 28 - -
Vian10g01825 261 ProSiteProfiles Zinc finger phorbol-ester/DAG-type profile. 40 94 IPR002219 -
Vian10g01825 261 SUPERFAMILY Cysteine-rich domain 90 142 IPR046349 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01825 Vian-Chr10 30061415 30062200 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g01825 - - gmx:100795400 446.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g01825 10 30061415 30062200 Vian10g01825 10 30061415 30062200 ECH