Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01824 ATGCCAGAGACTTTCACTGTGAAAGTTGAAGAGGGAAGGCCTGCAACTGATGGAAAACCATCTGCAGGTCCTGTCTATAGGAGCATTTATGCTAAAGATGCTCTCTTGGAAGTTCCTTCTCATTTGGAATCACCTTGGGATTTCTTCAGCAAAATGCTTGGTAGGCGTCAGAAGACAGAATCTAAGGCGGGTTCCTATGTATGGCTTACATATCAAGAGGTTTATGATGCTGCCTTGAAACTGGGTTTTGCCATGAGGAGCCGTGGTGTTGATCCAGGAGACCGATGTGGCATATTTGGATCCAACTGCCCTGAATGGATCATTGCAATGGAGGCTTGCAATAGTTGTGCAGTGTCATATGTTCCCTTATATGACACCCTTGGTCCTAATGCAGTGGAGTTTATCATAAATCATGCTGAAGTTTCAATTGCATTTGTTCAGGAAAAAAAAATTCAATCATGTTCTTCAAATCTTAAAACAATTGTGAGCTTTGGAAGTGTTTCAACTGCACAAAAGAAGGAAGCTGAGGAGCATGGTGTGTCCTGCTTCTCATGGGAAGAGTTTCTCCAGTTGGGATGTCTGGATTGGGATTTACCATTGAAAAAGAAGACAGACATTTGCACAATAATGTACACAAGTGGAACAACTGGAGATCCCAAAGGCGTCGTTATTAAGAATGAGGCTTTCATGGCTGAAGTGTTGTCTGTTGATCACATACTTATGTTAACAGACAGAGTGGCAGCAGAAGACGATGTGTACTTCTCCTTTCTTCCTCTTGCTCATGTATATGATCAAATAATGGAAACCTATTGCATCTCCAAGGGCTCATCAATAGGATTTTGGCAAGGAGATGTCAGGTTTTTGCTGGAAGATGTTCAGGCACTTCAACCAACTATATTTTGTGGTGTTCCTAGAGTTTATGATCGTATTTGTGCTGGTATCAAGAGCAGACTTGCCTCAGCAGGAGTACTGCGGAGTACATTGTTTCAGTATGCTTACAACTACAAGTTAAAATATTTGGAGAAGGGTCTTCCACAACACAAAGCAGCACCTCTGTTCGATAGGCTTGTGTTTGACAAGACAAAACAAGCACTGGGTGGACGTGTTCGCATCCTGTTATCAGGAGCTGCTCCTTTGCCTAGGCATGTGGAAGAGTTTATGAGGGTCACCAGTGGATCTACATTATCACAAGGATATGGTCTTACTGAAAGTTGTGCTGGGTGTTTCACTGCCATAGGTGATGTGTATTCTATGACAGGAACAGTTGGGGTTCCCATGACAACCATTGAAGCCAGGCTTGAATCTGTGCCAGAGATGGAATATGATGCACTTTCCAATGTAGCCCGAGGAGAAATTTGTCTGAGAGGAAATACCTTGTTCTCTGGTTATCACAAGCGTGAAGATCTGACCAAAGAGGTTATGGTTGATGGTTGGTTTCACACAGGAGACATTGGAGAGTGGCAACCAAATGGAGCCATGAAAATTATTGATAGGAAGAAGAATATCTTCAAATTATCTCAAGGAGAATATATTGCTGTGGAGAATATTGAAAACAAGTATTTGCAGTGCCCCCTTATAGCATCGATTTGGGTGTATGGAAACAGCTTTGAGTCATTCTTGGTGGCTGTTGTGGTCCCTGAAAGAAAGGCCATTGAGGATTGGGCAGTAATGCACAATGTGAGTGATGATTTTAAATCATTATGTGACAATCTAAAAGCAAGAAAGTACATTTTGGATGAGCTCAACAGCACTGGTCAGAAACTCCAACTCAGAGGATTTGAGCTGCTAAAAGCCATTCACCTGGACCCAAATCCCTTTGACGTGGAGAGAGATTTAATAACTCCAACCTTCAAATTGAAGAGACCACAATTGCTCAAGTACTATAAGGATCACATTGATCAACTATACAGAGAAGCAAAGGGAGCAATGCAGTGA 1935 0.4222 MPETFTVKVEEGRPATDGKPSAGPVYRSIYAKDALLEVPSHLESPWDFFSKMLGRRQKTESKAGSYVWLTYQEVYDAALKLGFAMRSRGVDPGDRCGIFGSNCPEWIIAMEACNSCAVSYVPLYDTLGPNAVEFIINHAEVSIAFVQEKKIQSCSSNLKTIVSFGSVSTAQKKEAEEHGVSCFSWEEFLQLGCLDWDLPLKKKTDICTIMYTSGTTGDPKGVVIKNEAFMAEVLSVDHILMLTDRVAAEDDVYFSFLPLAHVYDQIMETYCISKGSSIGFWQGDVRFLLEDVQALQPTIFCGVPRVYDRICAGIKSRLASAGVLRSTLFQYAYNYKLKYLEKGLPQHKAAPLFDRLVFDKTKQALGGRVRILLSGAAPLPRHVEEFMRVTSGSTLSQGYGLTESCAGCFTAIGDVYSMTGTVGVPMTTIEARLESVPEMEYDALSNVARGEICLRGNTLFSGYHKREDLTKEVMVDGWFHTGDIGEWQPNGAMKIIDRKKNIFKLSQGEYIAVENIENKYLQCPLIASIWVYGNSFESFLVAVVVPERKAIEDWAVMHNVSDDFKSLCDNLKARKYILDELNSTGQKLQLRGFELLKAIHLDPNPFDVERDLITPTFKLKRPQLLKYYKDHIDQLYREAKGAMQ 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01824 644 Pfam AMP-binding enzyme 64 506 IPR000873 -
Vian10g01824 644 MobiDBLite consensus disorder prediction 1 20 - -
Vian10g01824 644 Pfam AMP-binding enzyme C-terminal domain 516 567 IPR025110 -
Vian10g01824 644 SUPERFAMILY Acetyl-CoA synthetase-like 62 637 - -
Vian10g01824 644 Gene3D - 53 498 IPR042099 -
Vian10g01824 644 CDD LC-FACS_euk 64 637 IPR045311 GO:0004467|GO:0006631
Vian10g01824 644 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 20 636 - -
Vian10g01824 644 ProSitePatterns Putative AMP-binding domain signature. 209 220 IPR020845 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01824 Vian-Chr10 30050042 30056255 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g01824 5 637 Acyl Lipid Metabolism Gene Families AT4G23850 56.769 0.0 784
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g01824 K01897 - gmx:100779735 1197.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g01824 10 30050042 30056255 Vian10g01824 10 30050042 30056255 ECH