Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01819 ATGGCTTCCCTTCTGAGAAAGTTAAGGCCTTCTTCTGTGCCTGTTGCTGCCGTGAAAACTGAAGACAGCATAAGCAGCAGCTATGAGTACTCCATTGCCATGGTGTATAATGGCCCTCCTCTCTGTTACTCCATTCCTGAAATTCCTGCTTTCAAAATTGACCAAATTCCAGTTGCAACCATTGCTCCTCTCTCTCATGATGACTTCTCTGTCCCGGTAATCCAACCTCTTAGTAAAAGCCTTAACAAGAGGAAGCAGAACCCGTGTTCAGAAGATTCTGCTGTCCCTCCAAACTTAGATTCTCGTGCAACTGATTCAGCTCCACGTCTGTCTGGTACTGATGGTGACGACATGTACGAGAGTTTGGAGACTTTGAAAGTGCCCTGTGCTAGAGATGGCGCCATTCTTAACACAACTTTGGACACCACAGAATCAGGTCCAGGTTCAGGTTCAGGTTCAGGTTCAACCTCTCTTTTTGCTTCCTCTGATGGGATTTCTTCTTTGAGAGAAGAAGAGCAAGCAACAAGTCCCAAGCATGTGAAGCGTGTTTCTGCCGTGACCTTCTGTGATCCCGAGTCAAACTACATGATGGAGAGCGATAGTGATGAGTTTGGTGATTCGCAGGTTGAGAGTGTTCCTGTGATGGAACGTGCAGTGAGACCTGGGAAGAAGGGTTCTTGCTATAAGTGCCTCAAGGGGAACCAATTCACACCGAAGGAGGTTTGCATTGTTTGTAGTGCAAAGTATTGTCGCAGCTGTGTGGTGAGGGCCATGGGGTCCATGCCACAAGGAAGAAAATGTGTGACTTGCATTGGATACAGAATTGATGAAAGAAAGAGGAGGAAACTGGGGAAATCTTCGCGGATGATGAAGCAGTTGTTGTCTGAGTTGATTGTGGCTGAAGTCATGGATAATGAAAAGTCTTGTGAAGAAAATCAAATACCACCAGAGCTTGTTTTTGTCAACTCACAACCTCTGGACTGGGAACAGCTTTTGTTGCTTCTTAACTGTCGAAATCCCCCAAAACATCTTAAACCAGGATCCTATTGGTATGATAAAGCATCTGGATTTTGGGGAAAGGAAGGTCAACCACCCAGTGAGGTTATCAGCTCCCAGCTGCTTGTTGGAGGTCGCTTGGACAAGTATGCAAGCAATGGAGACACAAATGTGATTATAAATGATCGCCTGATTACAAAAAAAGAGTTATGGGTACTGCAGTTGGCTGGAGTGCCTTGTGAGGGAACACCAAACTTTTGGGTGAACGCTGATGGATCATACAGAGAAGAGGGACAGAGGAATGATAGGGGGTGTATATGGGAAAAGCGCACAACAAGGTTGGCTTGTGCAATTCTGTCTTTGCCAGTTCCTTCTAAGTCTGTAACTCTTTCTTGTGAAGGTGAAATACCAAACAAAGACAGTCCTCCTCGGAAAATACTTCACAAATTTCTACTTGTTGGTTCTGTCAATTCTGGTGCATGCACTATATTTAAACAGGCCAAGCTTCTGTATAATGTGCCTTTCTCTGAAAATGAGCTCGAAAATATCAAGTTGGTGATCCAAAGCAACCTGTTTACCTACCTTGGTATACTGCTGGAGGGGCGTGCAAATTTTGAAACAGATTTTTTGTTGGAGAATAGTAGAGAAAGACCTGTGGCTGAATCCACTTCATCAGCAGAGAATATCAGCTGTGATGATGTTGAAATAACACCCTATTCCATTGGCCCACGACTGAAAGCTTTCTCGGATTGGCTACTCAAATACATGGTGTCAGGTAACCTTGATGCAATATTTCCTGCTGCTATACGTGAATATGGACCACTTGTGGAAGGTGTGTGGAAGGACAAAGCCATTCAAGTAACGTATGACAGGCGAAATGAACTAGAAATGCTACCTAGAAGTGCAAACTATTTTCTGGACCGGGCTGTTGAAATTTCCAAGACAGACTATAAGCCATCTGATATGGACATCTTGTACGCTGAGGGCATATCGTTACCAAAAAGCCTTACTGCAATGGAATTTTCTTTCCCTAAATTAAGCAGTGAGGACTCTTTGCATGCTGATTATCAACATGACTCTTCTCTCAGATACCAACTGATCAGATTACATCCTAAAAGCCTTGGACCAAAGTGCAAGTGGTTGGAGATGTTTGAAGATACGGATGTTGTAATATTCTCAGTTGCTTTATCTGACTACGATGAGTACATTACAGACAGTGAAGGGGTTTCTACAAACAAAATGATGGCAGCTAAGGCTCTCTTTGAAAACATCATTGCACATCAAGCCTTTCATAACAAAAAATTTCTCCTAGTACTGACCAAATTTGATCTACTTGAGGAAAAGATTGAAGACGTTCCTCTATCGAAATGTGAATGGTTTAGTGATTTCAAACCATTTATCAGTCCCAATATGAAGAAAGGTTGTAGCAATGGCAATAACCCTTTGTTAGCTCAATCTGCTTTTCAATACATTGCTGTCAAGTTCAAGAGATTGTTCCATTCTCTCACTCACCGAATTCTCTTTGTTTCACTGGTTAATGGGTTGGAACCTGATACTGTTGATGAAGCTCTCAGAAATGGAAGGGAGGTCATGGAGTGGGATAAATGGGACCCCTCTATTGTAACAGATCCAAAGTCAGAGATTACATCAACAAGCATTGAGGACCCAAGTTACACATAA 2676 0.4297 MASLLRKLRPSSVPVAAVKTEDSISSSYEYSIAMVYNGPPLCYSIPEIPAFKIDQIPVATIAPLSHDDFSVPVIQPLSKSLNKRKQNPCSEDSAVPPNLDSRATDSAPRLSGTDGDDMYESLETLKVPCARDGAILNTTLDTTESGPGSGSGSGSTSLFASSDGISSLREEEQATSPKHVKRVSAVTFCDPESNYMMESDSDEFGDSQVESVPVMERAVRPGKKGSCYKCLKGNQFTPKEVCIVCSAKYCRSCVVRAMGSMPQGRKCVTCIGYRIDERKRRKLGKSSRMMKQLLSELIVAEVMDNEKSCEENQIPPELVFVNSQPLDWEQLLLLLNCRNPPKHLKPGSYWYDKASGFWGKEGQPPSEVISSQLLVGGRLDKYASNGDTNVIINDRLITKKELWVLQLAGVPCEGTPNFWVNADGSYREEGQRNDRGCIWEKRTTRLACAILSLPVPSKSVTLSCEGEIPNKDSPPRKILHKFLLVGSVNSGACTIFKQAKLLYNVPFSENELENIKLVIQSNLFTYLGILLEGRANFETDFLLENSRERPVAESTSSAENISCDDVEITPYSIGPRLKAFSDWLLKYMVSGNLDAIFPAAIREYGPLVEGVWKDKAIQVTYDRRNELEMLPRSANYFLDRAVEISKTDYKPSDMDILYAEGISLPKSLTAMEFSFPKLSSEDSLHADYQHDSSLRYQLIRLHPKSLGPKCKWLEMFEDTDVVIFSVALSDYDEYITDSEGVSTNKMMAAKALFENIIAHQAFHNKKFLLVLTKFDLLEEKIEDVPLSKCEWFSDFKPFISPNMKKGCSNGNNPLLAQSAFQYIAVKFKRLFHSLTHRILFVSLVNGLEPDTVDEALRNGREVMEWDKWDPSIVTDPKSEITSTSIEDPSYT 891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01819 891 FunFam Guanine nucleotide-binding protein subunit alpha 693 805 - -
Vian10g01819 891 ProSiteProfiles G-alpha domain profile. 478 874 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Vian10g01819 891 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 477 850 IPR027417 -
Vian10g01819 891 MobiDBLite consensus disorder prediction 80 108 - -
Vian10g01819 891 MobiDBLite consensus disorder prediction 139 178 - -
Vian10g01819 891 MobiDBLite consensus disorder prediction 80 117 - -
Vian10g01819 891 SUPERFAMILY FYVE/PHD zinc finger 202 271 IPR011011 -
Vian10g01819 891 Pfam G-protein alpha subunit 477 861 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Vian10g01819 891 MobiDBLite consensus disorder prediction 139 171 - -
Vian10g01819 891 FunFam Extra-large guanine nucleotide-binding protein 3 508 660 - -
Vian10g01819 891 Gene3D - 670 869 IPR027417 -
Vian10g01819 891 SUPERFAMILY Transducin (alpha subunit), insertion domain 507 659 IPR011025 GO:0007165
Vian10g01819 891 CDD G-alpha 480 838 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Vian10g01819 891 PRINTS Alpha G protein (transducin) signature 481 496 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Vian10g01819 891 PRINTS Alpha G protein (transducin) signature 767 776 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Vian10g01819 891 PRINTS Alpha G protein (transducin) signature 719 747 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Vian10g01819 891 SMART galpha_1 458 857 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Vian10g01819 891 PANTHER OS01G0977800 PROTEIN 16 390 - -
Vian10g01819 891 Gene3D - 508 660 IPR011025 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01819 Vian-Chr10 30018475 30023048 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g01819 - - gmx:112997598 1390.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g01819 10 30018475 30023048 Vian10g01819 10 30018475 30023048 ECH