Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01815 ATGATGGACATCATCAATGATCTCATTGAAGAGGCCAAGCTCCGTCTTCTCTGGTGGGCTCTTTGTATATTCGCCATTTCCTATTTCTTCACTCATTTCAAATGTAGAGACGGTGATTCAGACTTGTCATTTTTCTTGGAGAAAAACTTAGATGCATGCATACCATTAAGTTCTTTTGGTGTGATAGTTCAATCAGAATTTGAGTTTGAACTTGTGAAGTTTTACCTCAAAACTGCAAACTTAGAGTCTTTGATTGATACCTATACAAGTAAATCTATGTGGATGAATCTTCCCATGTCCATTCTGTTTGTTGCTGCTCTGCGCATTCTTTTGAACAAGGTGGAATTCCGTTGGAAGGTTCAGCCACCAAGATTACAAACTTATTTATCTCATTTGGAGAAAAATCAGCTGCCTCTGAATGATGAACGACTCTCTTCTTCACCTCCCCCTCCCAAATGGAAGAAGATTGACTCTCCTGTTGTGGAGGCTGCCTTGAATGATTTCATTGATCTGATTTTGAAGGATTTCGTGATAAATATGTGGTATTCAGACCTTACTCCAGATATGGAGTTTCCTGAGCTGATACGAGACTTAATCATGGACGCTATTTCTGAAGTGTCAGTGAGGGTTAAAGAGATAAACCTTGTTGACTTGCTCATGAGGGACATAGTTGATTTAGTAGGGGATCATATAGACCTTTTCAGAAGAAATCAAGATGCTATAGGTGTTGATGTCATGTTAACCTTATCTTCTGAGGAGAGGGATGAAAGATTGAAGTTTCATCTGTTGAATTCTAAGGAGCTTCATCCAGCTCTAATATCTCCAGAGAGTGAGTACAAGGTTCTCCAGAGGCTAACGAGTGGATTATTAGCTACGGTACTGAGAAAACGAGAAGTTCAATGTCCTGTCATTCGATGTATAGCTCGGGAACTTTTAACTTGTTTGATATTGCAACCGATCATGAACTTGGCAAGCCCTGCGTATATCAATGAGCTGATTGAATCCCTTCTACTTGTCCTTAATGATGATGGTATAAATTGGATGGGGGTCTGTGAACATTCAGCCAATACAACTCATAATCATGGCCATTCTGGTACTGGGGGTGGACATGATAATCAGACATCCTCTGCTGATTGGGCACAAATGCTGGAGGCTGCAACTCAGAGAAGAACTGAAGTTCTTATGCCTGAGAATCTGGAGAACATGTGGGCAAGAGGAAGGAATTATAGACGAAAACAGCATAAAAGTACCAAAACCGGCTCTCAGGACCCTTCTGTGAAGTGTCCTGCTATTGATGCAATTCCAGAAGGAATGTGTGCAATGCATTATGTGGGTTCAGATCCACACCTAAATGTTGTAGGCACAAATAGGTCAGAGTCTTCACCAGATCCTGACAAGGAACTCTGTTCTGAAGTAGACCATCATGTTGATGAGGGGAAGGATATCAGGGATATCCCTTCTAAAAAATTTAAAGATCTAAAGAGATCCAACAGTGCTTCTCTCCTGGGAAATCAACCTCTTCTTAAGGTATGCTCCCCAAGGTCAGAGGTCCACAACCCTGAATCCGAGAAACATGGTGAGGGATATAGGGGAAAGAGTGGTTCTGAAATGGTTATGAGAAGAGACGGACATTTTCTTCCAAAGCTTCGGTGCCGGGTTATGGGAGCATATTTTGAGAAACTAGGATCCACTTCTTTTGCTGTATATTCAATTGCAGTGACTGATGGTCTAGAGAAAACTTGGTTTGTTAGAAGAAGATACAGGAATTTTGAGCGATTGCATCGACATCTAAAAGATATTCCCAATTATTTGCTACATTTGCCTCCTAAAAGGATATTTTCCTCAAGCATAGACGATGCATTTGTCTATCAGCGTTGCATTCAGTTTGATAAATATCTCCAGGATCTCCTATCAATAGCTAATATTGCTGAACAACATGAGGTGTGGGACTTTTTGAGTGTTTCCTCAAAGAACTACTCCTTTGGGAAATCTTCTTCAATGATGAGGACCCTGGCAGTCAATGTAGATGATGCTGTGGATGATATTGTACGGCAGTTTAAAGGTGTTTCAGATGGTTTAATTCGAAAAGTTGTTGGTTCATCATCCCCTACTACTGAAGTTTCTTCCACGTCGACCAATCAAAACATGTCCTGGAGCATGGATGAGATGGATAAAAGTGTTCCAAGGCAGACTACTGCAGAGTCCGTGTTAAGCTCTGATAATGAGGAAGGTGAAAAGGAAGTTAATTTTGGTCATGAAAATATTGATAAAGAAGCAGAAGATAATGAGTCGAATTCTGACAATGAATTTAGCTTAAAGGAAGATTCACAACTGCTAACAAACCATGGTAATGAATGTACTAACTTGGATCTAGATAGAAAACATGATGTAGCAATGGAAGCTAAGGTTGGAAAGGATGTTTCAGCTACAACTTTCAATCCAATTCCTGATAATATGGAGGATCCAGTTGGAGTTCCACCAGAGGTCTGTAGTCAGCTGGATTTGATCTTCTTTTTGTTTTGCATATCACACTTGTTGATTGAGATATTTGGTTTGCGGTTACTTATTGATGCATGTTTAAGTTATGCATTTGCTGCTTATTCTCTTTGGGGTCATGCCTACATGTGGACCCCACCTAATGTGACTGTCCCTATTTTGAATTTGGTTGACAATGTATTTCAGCTTAAGAAAAGAGGCTGGTTAAGAAGACAGGTCTTTTGGATTTCAAAACAGATATTACAGGTGGTGATGGAAGATGCTATTGATGATTGGATCCTAAGTGAGATTCATTGGCTTCGCAGAGAGGACACCATTGCCCAAGGGATTCGGTGGGTCCAAGATATCCTCTGGCCTGGTGGTACATTTTTTTTAAGAATACAGACCCCTCAGGTGTTCATTGGCGGCAGTGCATATGATCAAAAGCCTTTACCAAGCATAAGTGAATCTGGTGGAAGCAAGATGACCAAATCACAGTCAGGATCTTTTGAGCTACAGCTTGAGGCTATTCGTAGAGCAAGTGATTTGAAGAAACTTCTCTTTGATGGAGCTCCAGCAGCTTTAGTTGGCTTAATTGGTCAGAAGCAGTACAAACGTTGTGCCAGTGATATATATTACTTTACTCAGTCTTCTATATGTGTGAAGCAACTTGCTTATGCAATACTTGAACTTCTACTTATTTCCATCTTTCCTGAGTTGCGGAGTGTTGTCATTAGTGTTCATGAGAACAACCTGTATAGAATGAGTAACACTAGTATTAGATTCTTGAAGAAGCCAGAACCACCGCTTTCCAACAACCACGGGAACTTAACGACACTGATCGAATTGCGTTTTCTCTTTTTTGTTGTGGCTATCAAGTATCGAACAGCACATGGCGAGCGCGGTAGATGCCTCGGGAAATCCAATCCCATCGTCGTCGGTGTTGATGGCATCATGGAAGCACATTGGGATCCGGTGCCACTCTGA 3462 0.4093 MMDIINDLIEEAKLRLLWWALCIFAISYFFTHFKCRDGDSDLSFFLEKNLDACIPLSSFGVIVQSEFEFELVKFYLKTANLESLIDTYTSKSMWMNLPMSILFVAALRILLNKVEFRWKVQPPRLQTYLSHLEKNQLPLNDERLSSSPPPPKWKKIDSPVVEAALNDFIDLILKDFVINMWYSDLTPDMEFPELIRDLIMDAISEVSVRVKEINLVDLLMRDIVDLVGDHIDLFRRNQDAIGVDVMLTLSSEERDERLKFHLLNSKELHPALISPESEYKVLQRLTSGLLATVLRKREVQCPVIRCIARELLTCLILQPIMNLASPAYINELIESLLLVLNDDGINWMGVCEHSANTTHNHGHSGTGGGHDNQTSSADWAQMLEAATQRRTEVLMPENLENMWARGRNYRRKQHKSTKTGSQDPSVKCPAIDAIPEGMCAMHYVGSDPHLNVVGTNRSESSPDPDKELCSEVDHHVDEGKDIRDIPSKKFKDLKRSNSASLLGNQPLLKVCSPRSEVHNPESEKHGEGYRGKSGSEMVMRRDGHFLPKLRCRVMGAYFEKLGSTSFAVYSIAVTDGLEKTWFVRRRYRNFERLHRHLKDIPNYLLHLPPKRIFSSSIDDAFVYQRCIQFDKYLQDLLSIANIAEQHEVWDFLSVSSKNYSFGKSSSMMRTLAVNVDDAVDDIVRQFKGVSDGLIRKVVGSSSPTTEVSSTSTNQNMSWSMDEMDKSVPRQTTAESVLSSDNEEGEKEVNFGHENIDKEAEDNESNSDNEFSLKEDSQLLTNHGNECTNLDLDRKHDVAMEAKVGKDVSATTFNPIPDNMEDPVGVPPEVCSQLDLIFFLFCISHLLIEIFGLRLLIDACLSYAFAAYSLWGHAYMWTPPNVTVPILNLVDNVFQLKKRGWLRRQVFWISKQILQVVMEDAIDDWILSEIHWLRREDTIAQGIRWVQDILWPGGTFFLRIQTPQVFIGGSAYDQKPLPSISESGGSKMTKSQSGSFELQLEAIRRASDLKKLLFDGAPAALVGLIGQKQYKRCASDIYYFTQSSICVKQLAYAILELLLISIFPELRSVVISVHENNLYRMSNTSIRFLKKPEPPLSNNHGNLTTLIELRFLFFVVAIKYRTAHGERGRCLGKSNPIVVGVDGIMEAHWDPVPL 1153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01815 1153 MobiDBLite consensus disorder prediction 700 770 - -
Vian10g01815 1153 MobiDBLite consensus disorder prediction 700 738 - -
Vian10g01815 1153 ProSiteProfiles PX domain profile. 547 659 IPR001683 GO:0035091
Vian10g01815 1153 Pfam PXA domain 158 336 IPR003114 -
Vian10g01815 1153 ProSiteProfiles PXA domain profile. 158 337 IPR003114 -
Vian10g01815 1153 Pfam PX domain 578 654 IPR001683 GO:0035091
Vian10g01815 1153 SMART PXA_3 158 341 IPR003114 -
Vian10g01815 1153 SMART PX_2 546 655 IPR001683 GO:0035091
Vian10g01815 1153 SUPERFAMILY PX domain 549 656 IPR036871 GO:0035091
Vian10g01815 1153 Gene3D - 551 664 IPR036871 GO:0035091
Vian10g01815 1153 PANTHER PX SERINE/THREONINE KINASE PXK 154 829 - -
Vian10g01815 1153 MobiDBLite consensus disorder prediction 739 770 - -
Vian10g01815 1153 Pfam Sorting nexin C terminal 900 1043 IPR013937 -
Vian10g01815 1153 MobiDBLite consensus disorder prediction 516 534 - -
Vian10g01815 1153 MobiDBLite consensus disorder prediction 513 534 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01815 Vian-Chr10 29976957 29993973 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g01815 K17925 - gmx:100804013 1485.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g01815 10 29976957 29993973 Vian10g01815 10 29976957 29993973 ECH