Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01804 ATGGCGACGCGTACGATCTCGCAGGAAGCTTTCGAAGAACTTGTGAAAGAGAACGTCGACGACCTCGGCATGGACCCCACCGAGGCCCTCCAAGACGCCATCCAGACCCTCACTCTTCAAGGCGTCGATCTCTCAGGCATCGTCACCTCCGTCCCCGGCGACACCAACCCCGTCATCGACTGCTTGGACCGCTTGAAGCACCTCCAATCCGAACCCGACGAGCACGAACTCGCCATAGCGTTCAACACGCTCCATGAATTGTGTTCGAATCCAAATCCAAATGCAAATTCTAATTCGGCAATTGCGACCAGAAACGGTGCCGTCGAGTTAACTTGTTCGCTCTGTTCCAAAATCCCCCGCGCCACTGGATCTCGCGAGCTCCTTCTCTCTGCTTTAAACGCATTGTCGTCGTTGCTTCACGATGTTCAGAGTACGGGCACGTTTCAGCGGTGTGACGGACCGACGATTGTGATTGGTTTTCTGGCTGATAATAAGCAGGATGTGGAGGTCTTGAGCAGTGGATTTCGCGTCGTGGCTTCTGCGGCGACCGGCGATGAGATCGTGAAGGAGACCTTTATGGAGTTGAAGGTTGATGAGCAGGTTTTGGAGATCTTGTCGTTGCATAAGAACAGGGGGATCCAGTGTTTGTATGACGCAGTTCGCGCGCTTTTAACTCCGGATGACAATCGAGTCGTGGCTTCGCAGGTGTATGGTTATGCACGAAAATTTGCCAAGATAGGAATTGCAGAAGCTCTTGTGGATTGTCTGAGTGCAGGGCTTTGCTCACCTGACCTAGTTCCAGCGTGCACCACTTTGAAATTCATTGCTGTAAATGATGAAATATGTAAATCCATTGCTGAGAAAGGTGGTGTCGATGCAGTACTCAGATGTATCGATGACAGTGGTGAACAAGGTAACAAAGCTGTTGCCAAAGTTTGTTGCTCATTACTTTCAAAGTTAGCAGGAAGTGACATGAACAAGAGTGAAATTGTTGGGAAAGGAGGTATGGAGAAGTTGTTCACACTTTCATGCATGTTTTCCGATGACCCATCTGTTTTGCAAGAGATTATGTCTATTATTTCTGTGCTGTGTTTAAGATCACCTGAAAACGCAGCCCGTGCCGTTGAAGCTGGTGCTGGTGACCTAGCTGTTCAGGCCATGAAGAAATTTCCTGCAGCACACCAAATGCAGAGAAACTCCTGTCTTATGATCAGAAATCTAGTTGTGAGAAATCCAGAAAACAGAACAACCTTGCTTTTGTATGGAATTGAGAAATACATAAGGAAAGCCAAGCAAACACATAGCAACTGTAAGGATGCTGCCACCGATGCGTTGAGGGATTTGGGCCTTGATAATTACAACTTGTAG 1368 0.4825 MATRTISQEAFEELVKENVDDLGMDPTEALQDAIQTLTLQGVDLSGIVTSVPGDTNPVIDCLDRLKHLQSEPDEHELAIAFNTLHELCSNPNPNANSNSAIATRNGAVELTCSLCSKIPRATGSRELLLSALNALSSLLHDVQSTGTFQRCDGPTIVIGFLADNKQDVEVLSSGFRVVASAATGDEIVKETFMELKVDEQVLEILSLHKNRGIQCLYDAVRALLTPDDNRVVASQVYGYARKFAKIGIAEALVDCLSAGLCSPDLVPACTTLKFIAVNDEICKSIAEKGGVDAVLRCIDDSGEQGNKAVAKVCCSLLSKLAGSDMNKSEIVGKGGMEKLFTLSCMFSDDPSVLQEIMSIISVLCLRSPENAARAVEAGAGDLAVQAMKKFPAAHQMQRNSCLMIRNLVVRNPENRTTLLLYGIEKYIRKAKQTHSNCKDAATDALRDLGLDNYNL 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01804 455 SMART arm_5 278 322 IPR000225 GO:0005515
Vian10g01804 455 SMART arm_5 323 365 IPR000225 GO:0005515
Vian10g01804 455 SMART arm_5 367 409 IPR000225 GO:0005515
Vian10g01804 455 PANTHER UNCHARACTERIZED 3 452 - -
Vian10g01804 455 SUPERFAMILY ARM repeat 66 434 IPR016024 -
Vian10g01804 455 Gene3D - 235 455 IPR011989 -
Vian10g01804 455 Gene3D - 56 234 IPR011989 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g01804 K24166 - gmx:100527792 722.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g01804 10 29860240 29865778 Vian10g01804 10 29860240 29865778 ECH